Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0756
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    30   1.5  
01_01_0250 + 2052599-2053358,2053581-2053604,2054813-2054848,205...    28   6.1  
07_01_0355 + 2597592-2598280,2599150-2599426                           28   8.0  

>02_05_0702 -
           31027908-31027958,31028062-31029311,31029665-31029842,
           31029955-31030017,31031597-31031704,31031772-31031836,
           31031928-31032015,31032104-31032157,31032234-31032380,
           31033358-31033429,31034077-31034226,31034317-31034430,
           31034762-31034875,31035925-31036077,31037437-31037529,
           31038202-31038318,31038984-31039086,31039192-31039376,
           31039448-31039522,31040451-31040534,31041547-31041588,
           31041668-31041847,31042109-31042162,31042239-31042280,
           31042869-31042967,31043040-31043174,31043325-31043427,
           31045061-31045134,31045227-31045270,31045393-31045471,
           31045592-31045705,31045842-31045946,31046027-31046161,
           31046447-31046546,31046870-31046883,31046936-31047004,
           31047079-31047182,31047299-31047347,31047931-31048023,
           31048102-31048210,31048619-31048755,31048851-31048928,
           31049015-31049104,31049402-31049467,31049546-31049638,
           31049711-31049839,31050024-31050122,31051366-31051512,
           31051605-31051910
          Length = 2050

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 293 DLLQNHNTSLDQMLQEDVSGKRKFKSTLTGEVNRVSAVLAD 415
           DLL+ HN  LD+ L+E V    + + +   E  R+SA +A+
Sbjct: 187 DLLEKHNLWLDEELKEKVKNLAELRKSNMDEEARMSAKVAE 227


>01_01_0250 +
           2052599-2053358,2053581-2053604,2054813-2054848,
           2055047-2056284
          Length = 685

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 523 WPPHSNPPPQTNSTSALXLTGPSSFQLQKPPGKR 624
           W P S+PPP ++S       GP++FQ+    G R
Sbjct: 45  WLPDSSPPPSSSSAPC----GPAAFQVNCDNGSR 74


>07_01_0355 + 2597592-2598280,2599150-2599426
          Length = 321

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 233 LPRTWXILQVLQPGPAQKLTQRLVHY 156
           L R   +L VL+PGPA   T+R +H+
Sbjct: 9   LRRPSTLLTVLRPGPAAAATKRSIHH 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,510,066
Number of Sequences: 37544
Number of extensions: 433329
Number of successful extensions: 1332
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)