Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0756
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.3  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.9  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 405  CWPTLELLWEACTSWPGRSPSAISG 479
            CW  L+  W + ++W G    A++G
Sbjct: 2760 CWNPLKWDWRSSSTWIGLLTGAVTG 2784


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +1

Query: 463 LQLYRVQSDADYEC*YSATSWP-PH 534
           L+ YR  S A Y C Y+AT    PH
Sbjct: 308 LEWYRTLSKACYNCPYNATDCERPH 332


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 511 SATSWPPHSNPPPQTNSTSALXLTGPSSFQLQKP 612
           S   WP   +PP +  S S    + P S    KP
Sbjct: 264 SGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKP 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,408
Number of Sequences: 2352
Number of extensions: 15338
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)