Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0754
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    44   0.005
UniRef50_UPI00005A207D Cluster: PREDICTED: similar to adrenomedu...    33   6.7  
UniRef50_Q16WW9 Cluster: Lupus la ribonucleoprotein; n=3; Coelom...    33   8.9  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +2

Query: 446 MGDGNHSPSGGPYARLPTRA 505
           MGDGNHSPSG PYA LPTRA
Sbjct: 1   MGDGNHSPSGRPYASLPTRA 20


>UniRef50_UPI00005A207D Cluster: PREDICTED: similar to
           adrenomedullin 2 precusor; n=2; Canis lupus
           familiaris|Rep: PREDICTED: similar to adrenomedullin 2
           precusor - Canis familiaris
          Length = 260

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 416 LALPLALLRSMGDGNH-SPSGGPYARLPTRAIKPRNPS 526
           L LP AL RS+G     +P   P AR P+ ++KPR+P+
Sbjct: 135 LLLPGALSRSLGGSQQPAPPREPPARAPSSSLKPRSPA 172


>UniRef50_Q16WW9 Cluster: Lupus la ribonucleoprotein; n=3;
           Coelomata|Rep: Lupus la ribonucleoprotein - Aedes
           aegypti (Yellowfever mosquito)
          Length = 1515

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 474 PDGEWLPSPIDLSNARGRARPLPTANSWFEYTE 376
           P  +W+P PIDL   RGR    P    + EY E
Sbjct: 430 PRPKWVPLPIDLPKQRGRRERTPRRRRYDEYEE 462


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,199,430
Number of Sequences: 1657284
Number of extensions: 13986800
Number of successful extensions: 32725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32717
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)