Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0754
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.3  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.7  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +3

Query: 300 SC-KIKKIIRRFCYFEFYFFNL 362
           SC KIKK  +R+CY+ + FF +
Sbjct: 103 SCAKIKKT-KRYCYYYYAFFGV 123


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 449 GDGNHSPSGGP 481
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 464  SPSGGPYARLPTRAIKPRNPSGNMSSVSALF 556
            SP+    +  P      R P G++ ++S++F
Sbjct: 936  SPASSDRSGTPRSTNGDRKPGGSLGALSSMF 966


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 140 ACKSGANPNSCYRRATKCILTELVA 214
           AC+ G  P  CY   T  + T L A
Sbjct: 111 ACREGEPPRICYYHFTLELYTVLGA 135


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 140 ACKSGANPNSCYRRATKCILTELVA 214
           AC+ G  P  CY   T  + T L A
Sbjct: 111 ACREGEPPRICYYHFTLELYTVLGA 135


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = +2

Query: 431 ALLRSMGDGNHSPSGGPYARLPTRAIKP-RNP 523
           +L RS      +P+G P  R   R  KP R P
Sbjct: 87  SLXRSSSPQTSAPTGPPIVRCALRKHKPNRKP 118


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 188 KCILTELVALSGRGGTRRRPQLKRTYAQLRYFRRNVCQLQ 307
           KC+  E  +  G+G   R+P+   +  QL+   R   + Q
Sbjct: 105 KCLSLERPSGGGKGKKMRKPRTIYSSLQLQQLNRRFQRTQ 144


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 483  YGPPDGEWLPSPIDLS 436
            Y   DG++LPS ID S
Sbjct: 2333 YRQGDGKYLPSDIDPS 2348


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 180 VLQNVYSQSLWLCQVGEV 233
           +L  V+   +W+C++G V
Sbjct: 147 ILATVFLAYVWICEMGVV 164


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 180 VLQNVYSQSLWLCQVGEV 233
           +L  V+   +W+C++G V
Sbjct: 147 ILATVFLAYVWICEMGVV 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,054
Number of Sequences: 336
Number of extensions: 3821
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)