Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0752
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   6.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.2  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -3

Query: 338 INTLRILMTKSSSHLYKKIEKTKLI*IWQRTNPLKFVFTNSFL 210
           I    +L+  +  H++  I  TKLI  ++ T  L+  F   F+
Sbjct: 47  ITASAVLLPFAIYHIFMHIVPTKLISFYKSTAILEIAFEVIFI 89


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 348 LIDNKYT*DINDQIFVSFI 292
           L+D+K T +IND I + +I
Sbjct: 892 LMDSKRTIEINDNISMPYI 910


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 348 LIDNKYT*DINDQIFVSFI 292
           L+D+K T +IND I + +I
Sbjct: 892 LMDSKRTIEINDNISMPYI 910


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 348 LIDNKYT*DINDQIFVSFI 292
           L+D+K T +IND I + +I
Sbjct: 892 LMDSKRTIEINDNISMPYI 910


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 348 LIDNKYT*DINDQIFVSFI 292
           L+D+K T +IND I + +I
Sbjct: 892 LMDSKRTIEINDNISMPYI 910


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 431 LRSDIEGRTTSMP 393
           L  D++GRTTS+P
Sbjct: 84  LLHDLKGRTTSVP 96


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 431 LRSDIEGRTTSMP 393
           L  D++GRTTS+P
Sbjct: 84  LLHDLKGRTTSVP 96


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 431 LRSDIEGRTTSMP 393
           L  D++GRTTS+P
Sbjct: 84  LLHDLKGRTTSVP 96


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 76  YYKYFVHYYNIIIFYFY 26
           YY Y+     + ++YFY
Sbjct: 101 YYFYYAFIILLCVYYFY 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,669
Number of Sequences: 336
Number of extensions: 2630
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)