Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0751
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55035 Cluster: 26S proteasome non-ATPase regulatory su... 150 3e-35
UniRef50_O17453 Cluster: 26S proteasome non-ATPase regulatory su... 117 2e-25
UniRef50_O61742 Cluster: Proteasome regulatory particle, non-atp... 113 3e-24
UniRef50_P55034 Cluster: 26S proteasome non-ATPase regulatory su... 107 2e-22
UniRef50_Q553E0 Cluster: VWFA domain-containing protein; n=2; Di... 93 4e-18
UniRef50_A5DWY2 Cluster: 26S proteasome regulatory subunit RPN10... 92 1e-17
UniRef50_Q7XGY3 Cluster: 26S proteasome regulatory subunit S5A, ... 87 5e-16
UniRef50_Q5CQJ0 Cluster: 26S proteasome regulatory subunit 5a wi... 84 2e-15
UniRef50_Q5KP07 Cluster: RPN10-like protein, putative; n=2; Filo... 83 4e-15
UniRef50_P38886 Cluster: 26S proteasome regulatory subunit RPN10... 83 4e-15
UniRef50_UPI0000499B9D Cluster: proteasome regulatory subunit; n... 79 7e-14
UniRef50_A5KAC7 Cluster: 26S proteasome non-ATPase regulatory su... 78 2e-13
UniRef50_UPI00005A2BB8 Cluster: PREDICTED: similar to 26S protea... 78 2e-13
UniRef50_Q4U9U3 Cluster: Putative uncharacterized protein; n=3; ... 76 9e-13
UniRef50_Q2UCW0 Cluster: RIB40 genomic DNA, SC012; n=5; Pezizomy... 76 9e-13
UniRef50_UPI00006CFB2F Cluster: Ubiquitin interaction motif fami... 71 3e-11
UniRef50_Q4QIH4 Cluster: Proteasome regulatory non-ATP-ase subun... 68 2e-10
UniRef50_Q7RH03 Cluster: 26s proteasome regulatory subunit s5a (... 65 2e-09
UniRef50_A0BVM1 Cluster: Chromosome undetermined scaffold_130, w... 62 1e-08
UniRef50_A2EEG1 Cluster: Ubiquitin interaction motif family prot... 52 9e-06
UniRef50_A2EVI3 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_A2Z593 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_Q01E05 Cluster: Histone mRNA stem-loop binding protein;... 45 0.001
UniRef50_A2FK58 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_A2EQF8 Cluster: 26S proteasome regulatory subunit S5-re... 42 0.010
UniRef50_Q7QVZ8 Cluster: GLP_239_46442_45663; n=1; Giardia lambl... 42 0.013
UniRef50_Q8SR64 Cluster: 26S PROTEASOME REGULATORY SUBUNIT S5A; ... 40 0.052
UniRef50_A2FWK5 Cluster: 26S proteasome regulatory subunit rpn10... 38 0.28
UniRef50_A7QTF9 Cluster: Chromosome undetermined scaffold_167, w... 33 4.5
UniRef50_Q4DY61 Cluster: DNA repair and transcription factor pro... 33 4.5
UniRef50_A7DPY4 Cluster: von Willebrand factor, type A precursor... 33 4.5
UniRef50_A7SMZ9 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.9
UniRef50_A7RHU2 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.9
UniRef50_A6PVM1 Cluster: Novel protein; n=2; Homo/Pan/Gorilla gr... 33 7.9
UniRef50_P10018 Cluster: Uncharacterized 14.7 kDa protein; n=5; ... 33 7.9
>UniRef50_P55035 Cluster: 26S proteasome non-ATPase regulatory
subunit 4; n=3; Diptera|Rep: 26S proteasome non-ATPase
regulatory subunit 4 - Drosophila melanogaster (Fruit
fly)
Length = 396
Score = 150 bits (363), Expect = 3e-35
Identities = 81/132 (61%), Positives = 94/132 (71%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N + +LV AKRL EKVN D+V
Sbjct: 82 GEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIV 141
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG*WSRPF 617
SFG+ NN +LT F+N LNGKD SHLVSVP G LS+AL++SP+ +G
Sbjct: 142 SFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGSV--LSDALLSSPIIQGEDGMGG 197
Query: 618 WALVCLPFEFGV 653
L FEFGV
Sbjct: 198 AGLGGNVFEFGV 209
Score = 127 bits (306), Expect = 3e-28
Identities = 60/80 (75%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 195
MVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 196 LATLTSDVGRIMSKLHRVQP 255
LATLTSD GRI SK+H VQP
Sbjct: 61 LATLTSDAGRIFSKMHLVQP 80
>UniRef50_O17453 Cluster: 26S proteasome non-ATPase regulatory
subunit 4; n=7; Schistosoma|Rep: 26S proteasome
non-ATPase regulatory subunit 4 - Schistosoma mansoni
(Blood fluke)
Length = 420
Score = 117 bits (282), Expect = 2e-25
Identities = 53/79 (67%), Positives = 64/79 (81%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVL 198
M E+T+I VDNSDYMRNGDF PTRLQAQ DAV L+C SK + NPEN +GLL+LAN EVL
Sbjct: 1 MSQEATIIAVDNSDYMRNGDFFPTRLQAQNDAVGLICQSKRQRNPENTIGLLSLANTEVL 60
Query: 199 ATLTSDVGRIMSKLHRVQP 255
TLT+DV +I ++LH V+P
Sbjct: 61 CTLTNDVSKIYNRLHLVEP 79
Score = 113 bits (271), Expect = 5e-24
Identities = 62/114 (54%), Positives = 79/114 (69%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G I + IRIAHLAL+HRQ ++ KMRIV F+GSP+ D KEL LAKRL EKVN D++
Sbjct: 81 GRIIFCSSIRIAHLALRHRQLRHQKMRIVCFIGSPILEDEKELTRLAKRLKKEKVNVDII 140
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG 599
+FGE+ N L+ F++TLNGKD SHL+SV A G V L + L+TSP+ G
Sbjct: 141 NFGENETNEQKLSEFIDTLNGKDGT--GSHLISV-APGTV-LHDTLMTSPVVAG 190
>UniRef50_O61742 Cluster: Proteasome regulatory particle,
non-atpase-like protein 10; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein
10 - Caenorhabditis elegans
Length = 346
Score = 113 bits (273), Expect = 3e-24
Identities = 53/80 (66%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 195
MV ESTMICVDNS+YMRNGDF PTRLQ+QQDAVNLV K R+NPEN VG+L++AN V+V
Sbjct: 1 MVQESTMICVDNSEYMRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMANSVQV 60
Query: 196 LATLTSDVGRIMSKLHRVQP 255
L++L+++ GR+M K H ++P
Sbjct: 61 LSSLSTEQGRLMMKNHSIEP 80
Score = 106 bits (255), Expect = 4e-22
Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPV-NXDXKELVXLAKRLXXEKVNCDV 434
G N + GI+IAHLALKHRQ +NHKMR+V+F+GSP+ + ELV +AK++ EKV CDV
Sbjct: 82 GKCNFIAGIKIAHLALKHRQNRNHKMRVVLFIGSPLEEIEMNELVKIAKKMKKEKVLCDV 141
Query: 435 VSFGE-DSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITS 584
+ FGE +S + +TFV+TLNGK+ S L+ VP G L++AL+ S
Sbjct: 142 IMFGENESDGHEKFSTFVDTLNGKEG--SGSSLIVVPQGS--SLTDALLQS 188
>UniRef50_P55034 Cluster: 26S proteasome non-ATPase regulatory
subunit 4; n=11; Eukaryota|Rep: 26S proteasome
non-ATPase regulatory subunit 4 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 386
Score = 107 bits (258), Expect = 2e-22
Identities = 49/77 (63%), Positives = 66/77 (85%), Gaps = 2/77 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
MVLE+TMIC+DNS++MRNGD+ P+RLQAQ +AVNL+C +KT+SNPEN VG+LT+A V
Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60
Query: 193 VLATLTSDVGRIMSKLH 243
VL T TSD+G+I++ +H
Sbjct: 61 VLTTPTSDLGKILACMH 77
Score = 89.8 bits (213), Expect = 5e-17
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+INL I+IA LALKHRQ KN + RI+VF GSP+ + K L + KRL V+ D+V
Sbjct: 83 GEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKKNSVSLDIV 142
Query: 438 SFGEDSXNN--PLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG 599
+FGED L + +N D SH+V VP+ G LS+ L+++P+ G
Sbjct: 143 NFGEDDDEEKPQKLEALLTAVNNND----GSHIVHVPS-GANALSDVLLSTPVFTG 193
>UniRef50_Q553E0 Cluster: VWFA domain-containing protein; n=2;
Dictyostelium discoideum|Rep: VWFA domain-containing
protein - Dictyostelium discoideum AX4
Length = 349
Score = 93.5 bits (222), Expect = 4e-18
Identities = 41/74 (55%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
M LE+T++C+DNS++MRNGDF P+R +AQ+DAVNL+C SKT+SNPE+ V ++++A E
Sbjct: 1 MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPE 60
Query: 193 VLATLTSDVGRIMS 234
VL TLT ++ +I+S
Sbjct: 61 VLVTLTQELSKILS 74
Score = 92.7 bits (220), Expect = 7e-18
Identities = 48/112 (42%), Positives = 71/112 (63%)
Frame = +3
Query: 255 NGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDV 434
NG I+ T ++IA LAL+HRQ + RI+ FVGSP+ +EL+ LAKRL V D+
Sbjct: 82 NGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKETKEELIQLAKRLKKNGVAVDI 141
Query: 435 VSFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPL 590
++FGE + N+ L F+N +N D ESHL++VP G + LS+ ++ SP+
Sbjct: 142 INFGEVTENSDKLEAFINDVNNND----ESHLLTVPPGPHI-LSDIILQSPI 188
>UniRef50_A5DWY2 Cluster: 26S proteasome regulatory subunit RPN10;
n=12; Ascomycota|Rep: 26S proteasome regulatory subunit
RPN10 - Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 305
Score = 91.9 bits (218), Expect = 1e-17
Identities = 49/111 (44%), Positives = 69/111 (62%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
GD N GI++A LALKHRQ K + RI++FVGSP+ KEL LAK++ V D++
Sbjct: 83 GDNNFSDGIQVAALALKHRQNKVQQQRIIIFVGSPIKELEKELEKLAKKMKKNNVAIDII 142
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPL 590
+FGE+S N L F + +N +D SHLV+VP G + L E + +SP+
Sbjct: 143 NFGEESINTSKLEKFHSVINNQD----NSHLVTVPPGPRL-LYEVIASSPI 188
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTL--ANVE 192
MVLE+TMI +DNS+YMRNGD+L +R AQ + +K SNPEN VG+L A +
Sbjct: 1 MVLEATMIAIDNSEYMRNGDYLTSRYDAQLTTTEFIFQNKVNSNPENTVGVLAYGGAGPQ 60
Query: 193 VLATLTSDVGRIMSKLHRVQ 252
VL+TLT+D G+I+S +H +
Sbjct: 61 VLSTLTTDFGKILSGVHETK 80
>UniRef50_Q7XGY3 Cluster: 26S proteasome regulatory subunit S5A,
putative; n=6; Oryza sativa|Rep: 26S proteasome
regulatory subunit S5A, putative - Oryza sativa subsp.
japonica (Rice)
Length = 550
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +1
Query: 25 LESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVEVL 198
LE+T+ICVD+S++MRNGD+ PTRLQAQ+DA NLV +K SNPEN VG+L +A V VL
Sbjct: 5 LEATVICVDDSEWMRNGDYPPTRLQAQEDAANLVVGTKMTSNPENTVGVLAMAGDRVRVL 64
Query: 199 ATLTSDVGRIMSKLHRVQ 252
TSD + ++ +H ++
Sbjct: 65 LAPTSDPVKFLACMHGLE 82
Score = 63.3 bits (147), Expect = 5e-09
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3
Query: 252 ANGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCD 431
A+G+ NL + IA L LK+R K RIVVFVGSPV + +L + K+L V+ D
Sbjct: 83 ASGEANLTATLNIAELVLKNRPDKRLSQRIVVFVGSPVKDE--KLETIGKKLKKYNVSLD 140
Query: 432 VVSFGEDSXNNP-LLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG 599
VV FGE P L V + G SH+V +P G L L +P+ G
Sbjct: 141 VVEFGESDDEKPEKLEALVAAVG------GSSHIVHIPPG--EDLRAVLANTPIITG 189
>UniRef50_Q5CQJ0 Cluster: 26S proteasome regulatory subunit 5a with
a vWA domain and two ubiquitin interacting motifs; n=2;
Cryptosporidium|Rep: 26S proteasome regulatory subunit
5a with a vWA domain and two ubiquitin interacting
motifs - Cryptosporidium parvum Iowa II
Length = 383
Score = 84.2 bits (199), Expect = 2e-15
Identities = 56/129 (43%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Frame = +3
Query: 219 RTYHVQAPSRPANGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXD--XKELVX 392
+T H R NG I+LL GI+IA LALKHR KN + RIV FVGSP+ D K+L
Sbjct: 71 KTMHAMDGIR-LNGKIDLLRGIQIAQLALKHRLNKNLRQRIVCFVGSPLEDDLTEKQLEK 129
Query: 393 LAKRLXXEKVNCDVVSFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEA 572
L K L V+ D++SFGE N L VN N +T S+ V V A L++A
Sbjct: 130 LGKVLKKNNVSIDIISFGEILVNRERLQALVNAANNDNT----SNFVEVAAP--TNLTDA 183
Query: 573 LITSPLDRG 599
L+ SP+ G
Sbjct: 184 LMASPIVLG 192
Score = 77.4 bits (182), Expect = 3e-13
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
M LE+T+IC+DNS+Y RNGD+ +R+ QQDA N + KT+ NPEN VG+L++A +E
Sbjct: 1 MTLEATVICLDNSNYSRNGDYGTSRMLQQQDATNFISGIKTQQNPENLVGILSMAGERIE 60
Query: 193 VLATLTSDVGRIMSKLHRVQ 252
+ T TSD+ + M + ++
Sbjct: 61 LRVTPTSDLSKTMHAMDGIR 80
>UniRef50_Q5KP07 Cluster: RPN10-like protein, putative; n=2;
Filobasidiella neoformans|Rep: RPN10-like protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 371
Score = 83.4 bits (197), Expect = 4e-15
Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 2/79 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
M LES M+ +DNS+YMRNGD+ PTR QAQ +AV V +KT +NPE+ VG++T+A +
Sbjct: 1 MPLESCMLILDNSEYMRNGDYPPTRFQAQAEAVQTVFTAKTDANPESAVGMMTMAGNSPS 60
Query: 193 VLATLTSDVGRIMSKLHRV 249
+L T T+D+GR+M L +V
Sbjct: 61 LLVTPTNDLGRLMHALSKV 79
Score = 80.6 bits (190), Expect = 3e-14
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +3
Query: 270 LLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVVSFGE 449
L T I IA LALKHR+ KN + RIV+FVGSP+ + LV L KRL V DVV+FG+
Sbjct: 87 LSTAISIAQLALKHRENKNQRQRIVIFVGSPLGESAESLVKLGKRLRKNNVFVDVVTFGD 146
Query: 450 DSXNNPLLTTFVNTLNGKDTRLG-ESHLVSVPAGGCVGLSEALITSPL 590
+ +N L G +G ES+LVSVP+G LS+ + +SP+
Sbjct: 147 EGRDND------EKLRGLVEAVGEESNLVSVPSGERF-LSDVIASSPI 187
>UniRef50_P38886 Cluster: 26S proteasome regulatory subunit RPN10;
n=12; Dikarya|Rep: 26S proteasome regulatory subunit
RPN10 - Saccharomyces cerevisiae (Baker's yeast)
Length = 268
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLT--LANVE 192
MVLE+T++ +DNS+Y RNGDF TR +AQ D+V + +K SNPEN VGL++ AN
Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR 60
Query: 193 VLATLTSDVGRIMSKLHRVQ 252
VL+T T++ G+I++ LH Q
Sbjct: 61 VLSTFTAEFGKILAGLHDTQ 80
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/111 (38%), Positives = 62/111 (55%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G +++ T ++IA L LKHRQ K RIV FV SP++ EL+ LAK L V D++
Sbjct: 83 GKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDII 142
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPL 590
+FGE N LL F+ +N SHL++V G + L E + +SP+
Sbjct: 143 NFGEIEQNTELLDEFIAAVNNPQEE--TSHLLTVTPGPRL-LYENIASSPI 190
>UniRef50_UPI0000499B9D Cluster: proteasome regulatory subunit; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome
regulatory subunit - Entamoeba histolytica HM-1:IMSS
Length = 302
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +1
Query: 28 ESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVEVLA 201
E+T+I +D SDYMRNGD+ P+R++AQ +AV + + R NPEN+VG + + +L
Sbjct: 3 EATIIIIDTSDYMRNGDYTPSRMEAQIEAVQAITSGRLRKNPENHVGFIAAGSESKRILV 62
Query: 202 TLTSDVGRIMSKLHRVQ 252
TLT D G+I+S LH +
Sbjct: 63 TLTGDFGKILSGLHEAK 79
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G + + +A LAL +R K + RI++FVGSP+N + E + L + D+V
Sbjct: 82 GSSDFKQALLVAKLALANRVDKIYTQRIILFVGSPLNINSDEAQTMVNLLKKSNIALDIV 141
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAG 548
SFGE N P++ F + + T LV+VPAG
Sbjct: 142 SFGEVVDNAPVIELFPSQMGDDCT------LVTVPAG 172
>UniRef50_A5KAC7 Cluster: 26S proteasome non-ATPase regulatory
subunit 4, putative; n=4; Plasmodium|Rep: 26S proteasome
non-ATPase regulatory subunit 4, putative - Plasmodium
vivax
Length = 482
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/78 (42%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Frame = +1
Query: 25 LESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVEVL 198
+E+T+ICVDNSDY RN D +P R +Q D VN++C +KT + +NN+G++ +A +V
Sbjct: 4 IEATIICVDNSDYNRNEDIVPNRFLSQIDCVNVLCCNKTSMHYKNNIGIVMMAGDKTKVK 63
Query: 199 ATLTSDVGRIMSKLHRVQ 252
+LT+D+G+++S +H ++
Sbjct: 64 VSLTNDIGQLLSCIHEIK 81
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +3
Query: 255 NGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDV 434
+G +++ + IA LALKHR KN +I++FVGSP+ + K+L+ K+L + D+
Sbjct: 83 DGTCDIVRSLLIAQLALKHRVDKNLGQKIMLFVGSPLKVNEKQLISTGKQLKKNNICLDI 142
Query: 435 VSFGEDSXNNPLLTTFVNTLN 497
+S+G+ N +L +++N
Sbjct: 143 ISYGDIHKNRDILMKLYDSVN 163
>UniRef50_UPI00005A2BB8 Cluster: PREDICTED: similar to 26S
proteasome non-ATPase regulatory subunit 4 (26S
proteasome regulatory subunit S5A) (Rpn10)
(Multiubiquitin chain binding protein) (Antisecretory
factor-1) (AF) (ASF); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 26S proteasome non-ATPase
regulatory subunit 4 (26S proteasome regulatory subunit
S5A) (Rpn10) (Multiubiquitin chain binding protein)
(Antisecretory factor-1) (AF) (ASF) - Canis familiaris
Length = 205
Score = 77.8 bits (183), Expect = 2e-13
Identities = 50/107 (46%), Positives = 61/107 (57%)
Frame = +3
Query: 333 MRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVVSFGEDSXNNPLLTTFVNTLNGKDTR 512
MRI VGSPV + K+LV LAKR EKV D++S G++ N LT FVNTL G D
Sbjct: 1 MRIFALVGSPVEDNEKDLVKLAKRFKKEKVYVDIISLGKEEVNTEKLTAFVNTLKGNDGT 60
Query: 513 LGESHLVSVPAGGCVGLSEALITSPLDRG*WSRPFWALVCLPFEFGV 653
S LV+VP G L++ALI+SP+ G L FEFGV
Sbjct: 61 --GSPLVAVPPG--PSLADALISSPV-LGWQGGAMLGLGASGFEFGV 102
>UniRef50_Q4U9U3 Cluster: Putative uncharacterized protein; n=3;
Piroplasmida|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 332
Score = 75.8 bits (178), Expect = 9e-13
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
M +E+ +IC+DNS+Y RNGDF+PTRL AQ DA+ L+ +K EN+VG++ LA +
Sbjct: 1 MTIEAALICIDNSEYSRNGDFVPTRLGAQIDAIGLIASAKLSEQFENSVGIVCLARKGSQ 60
Query: 193 VLATLTSDVGRIMSKLHRVQP 255
+L ++D+G ++ L V P
Sbjct: 61 LLTAPSNDLGTFLTDLQTVVP 81
Score = 59.3 bits (137), Expect = 8e-08
Identities = 35/106 (33%), Positives = 51/106 (48%)
Frame = +3
Query: 267 NLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVVSFG 446
+ + GI+ A LALKHR K+ + RI+ FV SP+ K V L K L V D++
Sbjct: 86 DFIRGIQTAQLALKHRLNKSQQQRIICFVASPIVEPVKHFVKLGKLLKKNNVILDIIDIS 145
Query: 447 EDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITS 584
+S L T + +N DT +L P G + LS+ + S
Sbjct: 146 NNSETEEKLKTLHSAVNNNDT---SHYLCCKPCSGTL-LSDMIFNS 187
>UniRef50_Q2UCW0 Cluster: RIB40 genomic DNA, SC012; n=5;
Pezizomycotina|Rep: RIB40 genomic DNA, SC012 -
Aspergillus oryzae
Length = 240
Score = 75.8 bits (178), Expect = 9e-13
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 NGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDV 434
+G +L + I++A LALKHR K+ + RI+VF SP+ D K LV LAK++ V+ DV
Sbjct: 42 HGTAHLSSSIQVAGLALKHRSEKSQRQRIIVFSCSPIEEDEKSLVKLAKKMKKINVSIDV 101
Query: 435 VSFGE-DSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPL 590
++FG+ +S L FV + G D SHL +P G + LSE L +P+
Sbjct: 102 IAFGDLESDQTKKLEAFVENVKGGD----GSHLAIIPPGPNL-LSEELQMTPI 149
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +1
Query: 142 RSNPENNVGLLTLANV--EVLATLTSDVGRIMSKLHRVQ 252
R +P++ VGL+++ EVL+T TSD G I++ LHR +
Sbjct: 2 RVHPQSAVGLMSMGGKGPEVLSTFTSDFGAILAGLHRTK 40
>UniRef50_UPI00006CFB2F Cluster: Ubiquitin interaction motif family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ubiquitin interaction motif family protein - Tetrahymena
thermophila SB210
Length = 392
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +3
Query: 267 NLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVVSFG 446
+ L ++IA L LKHR+ KN + RI+VFV SP+ D K L +AK+L V+ D+V+
Sbjct: 87 HFLNALQIAQLGLKHRKNKNMRQRIIVFVASPIVEDEKTLERVAKQLKKNNVSVDIVNLC 146
Query: 447 EDSXNN-PLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPL 590
+ N L F+ T+N D+ S+ ++V + G L+E L SP+
Sbjct: 147 QSGVNQIEKLDKFIQTVNSGDS----SYFLNVQS-GITSLTETLFNSPI 190
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/80 (40%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
M LE++++ +DN++Y RNGD LP+R +AQ + + + ++K + N EN VG+LT+ VE
Sbjct: 1 MTLEASIVILDNTEYARNGDHLPSRYEAQAETIQAIINAKQQMNMENAVGILTMGGPQVE 60
Query: 193 VLATLTSDVGRIMSKLHRVQ 252
VL T ++D I+ L V+
Sbjct: 61 VLITPSADPDAILGCLFGVK 80
>UniRef50_Q4QIH4 Cluster: Proteasome regulatory non-ATP-ase subunit,
putative; n=7; Trypanosomatidae|Rep: Proteasome
regulatory non-ATP-ase subunit, putative - Leishmania
major
Length = 346
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +3
Query: 243 SRPANGD-INLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEK 419
S P NG N +G++IA LAL HR + RIV FVGSP+ EL LAK+L +
Sbjct: 77 SIPVNGKRCNFSSGLQIASLALSHRTNSRAEKRIVAFVGSPIGETAAELEALAKKLRKDD 136
Query: 420 VNCDVVSFGEDSXNNPLLTTFVNTLNGKD 506
V DVV+FG +S N LL FV ++ K+
Sbjct: 137 VAVDVVAFGVES-NVELLQAFVKKVSKKE 164
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +1
Query: 22 VLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN--VEV 195
++E+ +C+D+++YMRNGD PTR+ A+QDA L+ ++K ++N EN +G LT V
Sbjct: 1 MVEACFLCLDSTEYMRNGDQYPTRMMAEQDAACLLANAKLQANAENTLGFLTTGGNACTV 60
Query: 196 LATLTSDVGRIMSKL 240
TLT++V IM+ +
Sbjct: 61 YETLTNNVDAIMTSI 75
>UniRef50_Q7RH03 Cluster: 26s proteasome regulatory subunit s5a
(Multiubiquitin chain binding protein). [mouse-ear
cress-related; n=3; Plasmodium (Vinckeia)|Rep: 26s
proteasome regulatory subunit s5a (Multiubiquitin chain
binding protein). [mouse-ear cress-related - Plasmodium
yoelii yoelii
Length = 461
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G +++ + IA LALKHR KN + +I++F+GSP+ + K+L+ K+L ++ D++
Sbjct: 103 GSCDIIRSLLIAQLALKHRIDKNLEQKIIIFIGSPIEANEKQLISTGKQLKKNNISIDII 162
Query: 438 SFGEDSXNNPLLTTFVNTLN 497
S+G + N L ++N
Sbjct: 163 SYGNVNKNREKLNKLFESIN 182
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 21/97 (21%)
Frame = +1
Query: 25 LESTMICVDNSDYMRNGDFLPTRLQAQQ-------------------DAVNLVCHSKTRS 147
+E+T+IC+DNSDY N D +P R +Q D VN++C +KT
Sbjct: 4 IEATIICIDNSDYNMNEDIVPNRFMSQVATPFDNMFMQAHAVFFHLIDCVNILCCNKTSM 63
Query: 148 NPENNVGLLTLA--NVEVLATLTSDVGRIMSKLHRVQ 252
+ +N++G+L +A +++ +LT+D+G+++S +H ++
Sbjct: 64 HYKNSIGVLVMAGDGIKIKVSLTNDIGQLLSCIHGIK 100
>UniRef50_A0BVM1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 365
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G++ I+ A LALKHR K RIV FV SP+ + LV LAKRL + D++
Sbjct: 83 GNLKFSVAIQQAQLALKHRINKQQHQRIVAFVASPIEEEVDTLVNLAKRLKKNNIAIDLI 142
Query: 438 SFGEDSXNN--PLLTTFVNTLNGKDTR 512
+FGE + ++ L T F N G+ ++
Sbjct: 143 NFGEQNEDHLKKLKTFFDNVQKGQSSK 169
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA--NVE 192
M LE+ ++ +DNS++ RNGD P+R AQQ+A+ L + SN E+ +GL+ V
Sbjct: 1 MPLEAAVVVLDNSEFSRNGDLEPSRWNAQQEAIELYINVVIDSNMESGMGLILGGGKQVR 60
Query: 193 VLATLTSDVGRIMSKLHRVQ 252
+L T T+D I + H+ +
Sbjct: 61 LLMTPTNDRDLIQGQFHKTR 80
>UniRef50_A2EEG1 Cluster: Ubiquitin interaction motif family
protein; n=1; Trichomonas vaginalis G3|Rep: Ubiquitin
interaction motif family protein - Trichomonas vaginalis
G3
Length = 406
Score = 52.4 bits (120), Expect = 9e-06
Identities = 32/114 (28%), Positives = 56/114 (49%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+I IR LAL+HR + RIV+FVGS + + + L + E V D++
Sbjct: 85 GEIRFENAIRCGFLALRHRDQEVSIKRIVIFVGSHHDFTQERIEALVRDTNKEAVGVDII 144
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG 599
+FG+D + +L +++ L SH + + + LS+ ++ SP+ G
Sbjct: 145 AFGDDVNSPEILESYIKQLT------QPSHFIRLQVSKTI-LSDLVLLSPIGPG 191
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 28 ESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTL--ANVEVLA 201
++ ++ +DNS NGDF P RL AQ A + + S +++ +N + T+ N +
Sbjct: 6 QAVVMMIDNSITSINGDFYPNRLAAQTLAADRLLASYHKNSAKNQFAVATIGSGNFGIQL 65
Query: 202 TLTSDVGRIMSKLHRV 249
+L D+ ++ L +
Sbjct: 66 SLCKDMIKVSHALDAI 81
>UniRef50_A2EVI3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 253
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 ICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVE--VLATLTS 213
+ +DN+D +GDF P RL AQ+ V+ + SNP++ +G++T+ + E + +LTS
Sbjct: 10 VLIDNTDISIDGDFYPNRLDAQKTTVDRLSQFYFSSNPKSQIGIVTMGSKEFGLRTSLTS 69
Query: 214 DVGRIMSKLHRVQP 255
I+ L ++P
Sbjct: 70 SHTTILKTLQNIKP 83
>UniRef50_A2Z593 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 198
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +1
Query: 13 TKMV--LESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSK 138
TKM +++TMICVD+S +M D+ PTRLQAQ DA NLV +K
Sbjct: 71 TKMARSMQATMICVDDSVWMLKEDYPPTRLQAQADAANLVFATK 114
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +1
Query: 25 LESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSK 138
+++TMICVD+S +M D+ PTRLQAQ DA NLV +K
Sbjct: 35 MQATMICVDDSVWMLKEDYPPTRLQAQADAANLVFATK 72
>UniRef50_Q01E05 Cluster: Histone mRNA stem-loop binding protein;
n=1; Ostreococcus tauri|Rep: Histone mRNA stem-loop
binding protein - Ostreococcus tauri
Length = 341
Score = 45.2 bits (102), Expect = 0.001
Identities = 16/30 (53%), Positives = 27/30 (90%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQ 108
MVLE+T++C+DNS+++RN D+ P+RLQ ++
Sbjct: 306 MVLEATILCLDNSEHVRNSDYAPSRLQVRE 335
>UniRef50_A2FK58 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 242
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 31 STMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVE--VLAT 204
S ++ +DNS NGDF PTR++AQ+ AVN + N + V + T + E + +
Sbjct: 7 SIVMIIDNSSTSINGDFFPTRIEAQRKAVNQLATYIFSLNSNSQVAVYTAGSKEFGIRVS 66
Query: 205 LTSDVGRIMSKLHRV 249
L S +I+ + ++
Sbjct: 67 LVSSSSKILPVISQI 81
Score = 39.9 bits (89), Expect = 0.052
Identities = 28/114 (24%), Positives = 56/114 (49%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G++ L T I+ A +A + K K I+ FVG P + + +A++ E + ++
Sbjct: 85 GNLRLETSIKQALIAFHFIEHKCSKS-ILCFVGGPNDINENNSQIIAQKCKKESADLHIL 143
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG 599
+FG + N PLL +++ K + + + +G + +S+A++ S L G
Sbjct: 144 TFGNNVPNVPLLEKLAKSVSPKSIFIN----LPIDSGDPLVISDAILKSDLGPG 193
>UniRef50_A2EQF8 Cluster: 26S proteasome regulatory subunit
S5-related protein; n=1; Trichomonas vaginalis G3|Rep:
26S proteasome regulatory subunit S5-related protein -
Trichomonas vaginalis G3
Length = 255
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +1
Query: 31 STMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVE 192
+T+I +DNS NGDF+ RL AQ + + +SN + VG++T++ E
Sbjct: 7 ATIILIDNSPTSINGDFITDRLNAQTTCAERLAKNYNQSNQNSQVGIITMSRPE 60
>UniRef50_Q7QVZ8 Cluster: GLP_239_46442_45663; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_239_46442_45663 - Giardia lamblia
ATCC 50803
Length = 259
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 LTGIRIAHLALKHRQGKNHKMRIVVFVGSP--VNXDXKELVXLAKRLXXEKVNCDVVSFG 446
LT I+IA L+L+HR + IV FV SP ++ D +++ L + L E ++ + FG
Sbjct: 39 LTAIQIALLSLRHRPTQTMASSIVAFVYSPLELSVDKEDMTNLGRELSSEAIDITLYVFG 98
Query: 447 EDSXNNPLLTTFV 485
E + N L ++
Sbjct: 99 EHAQANAQLLQYL 111
>UniRef50_Q8SR64 Cluster: 26S PROTEASOME REGULATORY SUBUNIT S5A;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME
REGULATORY SUBUNIT S5A - Encephalitozoon cuniculi
Length = 208
Score = 39.9 bits (89), Expect = 0.052
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 28 ESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVE 192
E+ ++ +DN +N D+LP+R AQ++A+ + K + E+ +G++ L +
Sbjct: 3 ETIVVLLDNGMASQNQDYLPSRFMAQKEAIESLISKKFEDSQESTIGIIPLVQAQ 57
>UniRef50_A2FWK5 Cluster: 26S proteasome regulatory subunit
rpn10-related protein; n=1; Trichomonas vaginalis
G3|Rep: 26S proteasome regulatory subunit rpn10-related
protein - Trichomonas vaginalis G3
Length = 231
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +1
Query: 28 ESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATL 207
E+ + +DNSD NGDF P+RL AQ+ A + + +P+ + + ++ + E +
Sbjct: 7 EAIIFLIDNSDTSINGDFDPSRLDAQKLACERLASYNLKQSPQTEIAIGSIGS-ECFG-I 64
Query: 208 TSDVGRIMSKLHR 246
+ SKLH+
Sbjct: 65 QQSLLNTTSKLHK 77
Score = 35.9 bits (79), Expect = 0.85
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+ + G+ A LALK+ RIV+F+GS N + + ++ E ++ D++
Sbjct: 86 GEALVTKGLLCAMLALKYASRFITSKRIVLFLGSKNNLTNDDAKSIIEKANDENISIDII 145
Query: 438 SFGED 452
+FG +
Sbjct: 146 AFGTE 150
>UniRef50_A7QTF9 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_167, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 85
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 623 SPEGPAPSPPIERTCYQSLRKPNTASSWHRHKVTLPQSS 507
SP P PIE C +SL+ + +++HR K LP S
Sbjct: 36 SPNAEQPQEPIELNCPKSLKPSRSKANFHRIKHPLPHQS 74
>UniRef50_Q4DY61 Cluster: DNA repair and transcription factor
protein, putative; n=2; Trypanosoma|Rep: DNA repair and
transcription factor protein, putative - Trypanosoma
cruzi
Length = 356
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 34 TMICVDNSDYMRNG-DFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTL 180
T++ +D S+ M + D+LPTRL A + + H+ +NP ++G++T+
Sbjct: 4 TVLLLDGSEAMNSSADYLPTRLLALRPQLGRFVHAYLDANPLASLGVVTM 53
>UniRef50_A7DPY4 Cluster: von Willebrand factor, type A precursor;
n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep: von
Willebrand factor, type A precursor - Candidatus
Nitrosopumilus maritimus SCM1
Length = 316
Score = 33.5 bits (73), Expect = 4.5
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 40 ICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTL-ANVEVLATLTSD 216
I +D S+ M D+ PTRL A ++A+N + + P++NVG++ + ++ LT D
Sbjct: 92 IVLDGSESMAATDYEPTRLDAAKNAINNLI---LKMGPQHNVGVVLFESGATTVSYLTPD 148
Query: 217 VGRIMSKLHRVQ 252
+ ++ + ++
Sbjct: 149 KEKSVNAISSIE 160
>UniRef50_A7SMZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1137
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 623 SPEGPAPSPPIERTCYQSLRKPNTASSWHRHKVTLP--QSSVFP 498
SP+ +PSPP E T +Q P S++ +H ++ P S +FP
Sbjct: 714 SPQTQSPSPPAEYTGFQKAFTPYVQSNYPKHFISPPPRYSDMFP 757
>UniRef50_A7RHU2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 298
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 31 STMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPEN 159
S M+ DN ++ N DF ++ ++ +N V S + PEN
Sbjct: 74 SVMVSHDNERFVDNNDFTSRKMLTAEEMINAVFESNLNNRPEN 116
>UniRef50_A6PVM1 Cluster: Novel protein; n=2; Homo/Pan/Gorilla
group|Rep: Novel protein - Homo sapiens (Human)
Length = 83
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 617 EGPAPSPPIERTCYQSLRKPNTASSWHR 534
+ P PSP R Q+ R P +A SWHR
Sbjct: 52 QAPRPSPAFSRPKGQAARPPGSARSWHR 79
>UniRef50_P10018 Cluster: Uncharacterized 14.7 kDa protein; n=5;
Bacteria|Rep: Uncharacterized 14.7 kDa protein -
Escherichia coli
Length = 131
Score = 32.7 bits (71), Expect = 7.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 216 RRTYHVQAPSRPANGDINLLTGIRIAHLALKHRQGK 323
R +H QAP RP + D+ IR HLA++ +QG+
Sbjct: 44 RGQHHRQAPRRPRSSDLLKPGQIRAQHLAVEEQQGR 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,456,981
Number of Sequences: 1657284
Number of extensions: 13120551
Number of successful extensions: 36259
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36228
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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