Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0751
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.4  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 497 WERHSTGGESPCVCASWRLC 556
           WE  S   E   VCASW LC
Sbjct: 542 WENLSKRREED-VCASWPLC 560


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 646 NSKGRQTRAQKGLLHHPLS 590
           +S  +Q + Q+ LLHHP S
Sbjct: 81  SSSAQQQQQQQQLLHHPSS 99


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 272  IDRNPHCTFSFKTPSGKESQDAHSSFCRFPCQ 367
            +D N    FS  + S K  + AH++F   PCQ
Sbjct: 1022 LDANGRAIFS--SDSLKRRKGAHTTFAPGPCQ 1051


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,674
Number of Sequences: 2352
Number of extensions: 13980
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)