Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0751
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease r... 150 2e-36
AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p pro... 150 2e-36
AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA... 150 2e-36
BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p pro... 29 4.2
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase... 29 4.2
AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA... 29 4.2
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P... 29 7.3
AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p pro... 28 9.6
AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-P... 28 9.6
>S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease
regulatory complexnon-ATPase subunit protein.
Length = 396
Score = 150 bits (363), Expect = 2e-36
Identities = 81/132 (61%), Positives = 94/132 (71%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N + +LV AKRL EKVN D+V
Sbjct: 82 GEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIV 141
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG*WSRPF 617
SFG+ NN +LT F+N LNGKD SHLVSVP G LS+AL++SP+ +G
Sbjct: 142 SFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGSV--LSDALLSSPIIQGEDGMGG 197
Query: 618 WALVCLPFEFGV 653
L FEFGV
Sbjct: 198 AGLGGNVFEFGV 209
Score = 123 bits (296), Expect = 2e-28
Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 195
MVLESTMI DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMISFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 196 LATLTSDVGRIMSKLHRVQP 255
LATLTSD GRI SK+H VQP
Sbjct: 61 LATLTSDAGRIFSKMHLVQP 80
>AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p
protein.
Length = 433
Score = 150 bits (363), Expect = 2e-36
Identities = 81/132 (61%), Positives = 94/132 (71%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N + +LV AKRL EKVN D+V
Sbjct: 119 GEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIV 178
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG*WSRPF 617
SFG+ NN +LT F+N LNGKD SHLVSVP G LS+AL++SP+ +G
Sbjct: 179 SFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGSV--LSDALLSSPIIQGEDGMGG 234
Query: 618 WALVCLPFEFGV 653
L FEFGV
Sbjct: 235 AGLGGNVFEFGV 246
Score = 134 bits (323), Expect = 1e-31
Identities = 63/84 (75%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 QNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN 186
+NTKMVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N
Sbjct: 34 KNTKMVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSN 93
Query: 187 -VEVLATLTSDVGRIMSKLHRVQP 255
VEVLATLTSD GRI SK+H VQP
Sbjct: 94 TVEVLATLTSDAGRIFSKMHLVQP 117
>AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA
protein.
Length = 396
Score = 150 bits (363), Expect = 2e-36
Identities = 81/132 (61%), Positives = 94/132 (71%)
Frame = +3
Query: 258 GDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNXDXKELVXLAKRLXXEKVNCDVV 437
G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N + +LV AKRL EKVN D+V
Sbjct: 82 GEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKVNVDIV 141
Query: 438 SFGEDSXNNPLLTTFVNTLNGKDTRLGESHLVSVPAGGCVGLSEALITSPLDRG*WSRPF 617
SFG+ NN +LT F+N LNGKD SHLVSVP G LS+AL++SP+ +G
Sbjct: 142 SFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGSV--LSDALLSSPIIQGEDGMGG 197
Query: 618 WALVCLPFEFGV 653
L FEFGV
Sbjct: 198 AGLGGNVFEFGV 209
Score = 127 bits (306), Expect = 2e-29
Identities = 60/80 (75%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 195
MVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 196 LATLTSDVGRIMSKLHRVQP 255
LATLTSD GRI SK+H VQP
Sbjct: 61 LATLTSDAGRIFSKMHLVQP 80
>BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p
protein.
Length = 1221
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 43 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 216
CV Y TRL Q QD + + +K N NN +LTL +E +AT S+
Sbjct: 134 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 192
>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
protein.
Length = 1924
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 43 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 216
CV Y TRL Q QD + + +K N NN +LTL +E +AT S+
Sbjct: 836 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 894
>AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA
protein.
Length = 1929
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 43 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 216
CV Y TRL Q QD + + +K N NN +LTL +E +AT S+
Sbjct: 842 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 900
>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
protein.
Length = 2695
Score = 28.7 bits (61), Expect = 7.3
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 650 SKFERETNQSPEGPAPSPPIERTCYQSLRKPNTASSWHRHKVTLPQSSVFP 498
S F R N P P + T L KP TAS VT+P + P
Sbjct: 1172 SMFNRALNNQPVEKEPPANVVITSSDPLPKPTTASVQPTLSVTIPAQHIKP 1222
>AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p
protein.
Length = 438
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 7 QNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTL 180
QN ++ + +D S+ M D PTRL+ + L NP + +GL+ L
Sbjct: 55 QNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIAL 112
>AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-PA
protein.
Length = 438
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 7 QNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTL 180
QN ++ + +D S+ M D PTRL+ + L NP + +GL+ L
Sbjct: 55 QNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIAL 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,565,735
Number of Sequences: 53049
Number of extensions: 642457
Number of successful extensions: 1853
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -