Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0748
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph...    30   2.5  
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P...    30   2.5  
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P...    30   2.5  
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    29   4.4  
AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p pro...    29   4.4  
AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-P...    29   4.4  
AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA ...    29   4.4  
BT029080-1|ABJ17013.1|  484|Drosophila melanogaster IP10471p pro...    29   5.8  
AE014297-3251|AAF56080.2|  209|Drosophila melanogaster CG13834-P...    29   5.8  

>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alpha1,2
            protein.
          Length = 3367

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 133  CDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFG 14
            CD  + ERH+  D    + D+C +L L   +   NKL  G
Sbjct: 1803 CDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRG 1842


>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
            isoform A protein.
          Length = 2731

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 133  CDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFG 14
            CD  + ERH+  D    + D+C +L L   +   NKL  G
Sbjct: 1803 CDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRG 1842


>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
            isoform B protein.
          Length = 3375

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 133  CDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFG 14
            CD  + ERH+  D    + D+C +L L   +   NKL  G
Sbjct: 1803 CDKCQAERHHLVDNGCKICDNCTLLLLDYMELVGNKLRRG 1842


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +1

Query: 7   RYRQTQVC*SD--IYHRRGSGSGSHPARWWRNR*SSGARRVRRHSH 138
           R ++ + C S   + H+ G G  +HPARW      +   R+RR  H
Sbjct: 207 RQQEPRACRSAQALRHQGGQGERAHPARWPEEGLCAPGARLRRPGH 252


>AY128477-1|AAM75070.1|  939|Drosophila melanogaster RE39339p
           protein.
          Length = 939

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 473 VLQRRDWENPGVPNLIALQHIPLSPAGVIAKRARTDRPSQ 592
           V+ RR W +PG+ N + L    + PA     R R  +P Q
Sbjct: 14  VVPRRRWCSPGLSNAVRLSSSQMDPADERVLRKRKFQPQQ 53


>AE014298-3060|AAF50875.1|  223|Drosophila melanogaster CG11229-PA
           protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -3

Query: 527 ARRLSWERQGFPSHD-VVKRRPVNCNTTHYRANWVPGPPS 411
           A R SW      SH  ++    VN + T  R+ W PGPP+
Sbjct: 170 AGRCSWSPSALWSHILIIFSIVVNASATASRSFWFPGPPA 209


>AE014298-628|AAF45943.3|  939|Drosophila melanogaster CG3626-PA
           protein.
          Length = 939

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 473 VLQRRDWENPGVPNLIALQHIPLSPAGVIAKRARTDRPSQ 592
           V+ RR W +PG+ N + L    + PA     R R  +P Q
Sbjct: 14  VVPRRRWCSPGLSNAVRLSSSQMDPADERVLRKRKFQPQQ 53


>BT029080-1|ABJ17013.1|  484|Drosophila melanogaster IP10471p
           protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -2

Query: 621 CHSPFRCRNCWEGRSVRALFAITPAGERGMCCKAIKLGT 505
           C+    C NC   RSV+      P G RG C  + KL T
Sbjct: 61  CNGHVLCNNC-RSRSVKCPVCRVPLGPRGRCLLSDKLFT 98


>AE014297-3251|AAF56080.2|  209|Drosophila melanogaster CG13834-PA
           protein.
          Length = 209

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -2

Query: 621 CHSPFRCRNCWEGRSVRALFAITPAGERGMCCKAIKLGT 505
           C+    C NC   RSV+      P G RG C  + KL T
Sbjct: 145 CNGHVLCNNC-RSRSVKCPVCRVPLGPRGRCLLSDKLFT 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,606,109
Number of Sequences: 53049
Number of extensions: 559557
Number of successful extensions: 1193
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)