Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0744
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    26   0.26 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.26 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.2  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 396 VGATCFLLPYSSIIYHFFAHSPPTHIV 476
           + A+  LLP++  IYH F H  PT ++
Sbjct: 47  ITASAVLLPFA--IYHIFMHIVPTKLI 71


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
 Frame = +3

Query: 75  FYSHTFQSYKLFQIILNSFTIYLFC*CSQKYIFKHKMFVCGKI*FNKLLMRNTLLFYKHY 254
           F  +  +    F  +  +F ++L       Y   H +F C  I F    +  T  FY  +
Sbjct: 48  FKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAF 107

Query: 255 LKNL----IYFEFIL-RFHLNSLFCL 317
           +  L     Y+ FI+   HL  L C+
Sbjct: 108 IILLCVYYFYYAFIIFTVHLLFLLCI 133


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 228 NTLLFYKHYLKNLIYFEF 281
           N L F  ++L NL+++EF
Sbjct: 242 NWLFFLANFLTNLLFWEF 259


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 344 STSQHHHHY 370
           ++SQHHHH+
Sbjct: 49  ASSQHHHHH 57


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 408 CFLLPYSSIIYHFFAHSPPTH 470
           C + P  +  YHF  H+  TH
Sbjct: 155 CPIHPGMTFRYHFNVHNSGTH 175


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 421 GRRKHVAPTPGDWEK 377
           G+ KH  PTP D  K
Sbjct: 312 GKLKHGGPTPSDATK 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,566
Number of Sequences: 336
Number of extensions: 3374
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)