Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0744
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.75 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.75 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.3  
AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    25   2.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   4.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.2  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 387 SPGVGATCFLLPYSSIIYHFFAHSPPTHIVFHT-IHPFLLRSP 512
           SPG      LLPY   + H   H    H  +HT +H +   SP
Sbjct: 162 SPGPIHPAVLLPYPQHVLHPAHHPALLHPAYHTGLHHYYQPSP 204


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 387 SPGVGATCFLLPYSSIIYHFFAHSPPTHIVFHT-IHPFLLRSP 512
           SPG      LLPY   + H   H    H  +HT +H +   SP
Sbjct: 162 SPGPIHPAVLLPYPQHVLHPAHHPALLHPAYHTGLHHYYQPSP 204


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 404 NMFSPSILFYHIPFLRSLPSYP-YRLSHN 487
           N+F+P+ L YH P +   P Y   R SH+
Sbjct: 380 NLFNPAALAYHDPAIYLDPRYQMLRASHH 408


>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 664 NESVRGSLKVAPVTEKLRSARLGWYGHVMRRNENEVVKRVLTMNVERFRERGD 506
           N+ +   + + P T+ LR+   G+  H+M+R  +  V+ +     E  RER D
Sbjct: 31  NKRIVEEVAIIP-TKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERRD 82


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.4 bits (43), Expect(2) = 4.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 350 SQHHHHY 370
           SQHHHH+
Sbjct: 181 SQHHHHH 187



 Score = 20.6 bits (41), Expect(2) = 4.2
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +2

Query: 356 HHHHYP 373
           HHHH+P
Sbjct: 187 HHHHHP 192


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 464 RRGVSEEMVYDRRVWKEKT 408
           RR   EEM+  R+ +KEKT
Sbjct: 866 RRKAHEEMLLKRQEYKEKT 884


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,777
Number of Sequences: 2352
Number of extensions: 13274
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)