Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0744
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05136-1|CAA28782.1|  590|Drosophila melanogaster protein ( Dros...    29   6.0  
BT023901-1|ABA81835.1|  430|Drosophila melanogaster IP14630p pro...    29   6.0  
AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA ...    29   6.0  
AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain ...    29   6.0  

>X05136-1|CAA28782.1|  590|Drosophila melanogaster protein (
           Drosophila mRNA forDeformed (Dfd) protein. ).
          Length = 590

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 559 PHFHSVSSHVHTIPNVHSSASLS 627
           PH HS  SH H++P+ HS++++S
Sbjct: 96  PHSHS-HSHTHSLPHHHSNSAIS 117


>BT023901-1|ABA81835.1|  430|Drosophila melanogaster IP14630p
           protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 559 PHFHSVSSHVHTIPNVHSSASLS 627
           PH HS  SH H++P+ HS++++S
Sbjct: 96  PHSHS-HSHTHSLPHHHSNSAIS 117


>AE014297-519|AAF54083.2|  586|Drosophila melanogaster CG2189-PA
           protein.
          Length = 586

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 559 PHFHSVSSHVHTIPNVHSSASLS 627
           PH HS  SH H++P+ HS++++S
Sbjct: 96  PHSHS-HSHTHSLPHHHSNSAIS 117


>AE001572-6|AAD19796.1|  586|Drosophila melanogaster homeodomain
           protein protein.
          Length = 586

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +1

Query: 559 PHFHSVSSHVHTIPNVHSSASLS 627
           PH HS  SH H++P+ HS++++S
Sbjct: 96  PHSHS-HSHTHSLPHHHSNSAIS 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,234,673
Number of Sequences: 53049
Number of extensions: 535344
Number of successful extensions: 1420
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)