Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0744
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75955-7|CAB00121.1| 550|Caenorhabditis elegans Hypothetical pr... 33 0.26
AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical ... 31 0.79
Z81100-3|CAD92386.1| 333|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical pr... 29 4.2
U53340-5|AAR25650.1| 425|Caenorhabditis elegans Hypothetical pr... 28 5.5
U53340-4|AAA96209.2| 445|Caenorhabditis elegans Hypothetical pr... 28 5.5
AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine re... 28 5.5
Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical pr... 28 7.3
U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.3
>Z75955-7|CAB00121.1| 550|Caenorhabditis elegans Hypothetical
protein R07B7.12 protein.
Length = 550
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 308 ILFENFKH*YNVSTSQHHHHYPALLPVTWGRRNMFSPSI 424
IL NF H Y+ S H + YP+ + +G+R++F I
Sbjct: 313 ILVPNFSHNYHQEFSSHFNAYPSYHSIFYGKRDVFVEKI 351
>AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical
protein Y51F10.8 protein.
Length = 204
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3
Query: 691 E*REWNRIRNESVRGSLKVAPVTEKLRSARLGWYGHVMRRNE 566
E RE N I E VR K+ ++ +LGW GHV RR +
Sbjct: 94 EQRERN-IHREEVREKSKLRDPLIHIKKRKLGWAGHVARRTD 134
>Z81100-3|CAD92386.1| 333|Caenorhabditis elegans Hypothetical
protein K08G2.9 protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +3
Query: 423 YSSIIYHFFAHSPPTHIVFHTIHPFLLRSPL---SLNLSTFIVN-TLLTTSFSFRLITCP 590
YSSI+Y F S P H+ + L ++P+ S+ L+ F +N T FS L P
Sbjct: 12 YSSILYTIFGISLPIHL--FGAYCVLYKTPVLMKSVKLALFNLNFWAATLDFSITLFMQP 69
Query: 591 YH--PKRALLSFSV 626
Y+ P A LS +
Sbjct: 70 YYCTPANAGLSLGL 83
>Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical
protein M05D6.2 protein.
Length = 451
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 411 FLLPYSSIIYHFFAHSPPTHIVFHTIHPFLLRSP 512
F YS++I F H+P TH ++ P + P
Sbjct: 414 FYAMYSNLIQEFQGHTPSTHAIYRADSPSSMPGP 447
>U53340-5|AAR25650.1| 425|Caenorhabditis elegans Hypothetical
protein F02E8.2b protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 483 TIHPFLLRSPLSLNLSTFIVNTLLTTSFSFRLITCPYHPKRALLSFS 623
T+H ++ P S ++ L+T + F + PYH +R ++ ++
Sbjct: 315 TVHTKNVQPPRSQQAQKMVIKMLVTVTAVFFVCYLPYHAQRLIVKYN 361
>U53340-4|AAA96209.2| 445|Caenorhabditis elegans Hypothetical
protein F02E8.2a protein.
Length = 445
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 483 TIHPFLLRSPLSLNLSTFIVNTLLTTSFSFRLITCPYHPKRALLSFS 623
T+H ++ P S ++ L+T + F + PYH +R ++ ++
Sbjct: 335 TVHTKNVQPPRSQQAQKMVIKMLVTVTAVFFVCYLPYHAQRLIVKYN 381
>AC084154-6|AAO91684.1| 319|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 64 protein.
Length = 319
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 129 FTIYLFC*CSQKYIFKHKMF---VCGKI*FNKLLMRNTLLFYKHYLKNLIY 272
++++ C + I H ++ +C K K++ R LLF+ HYL L+Y
Sbjct: 93 YSLWSTCGITMGLINLHTLYYRTICLKSFDPKMIKRRNLLFFWHYLVPLVY 143
>Z75550-9|CAE54924.1| 1291|Caenorhabditis elegans Hypothetical
protein T22C1.10b protein.
Length = 1291
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 614 QLLCHRCHFQTSSNGFIPD 670
++LC RCH T SN F D
Sbjct: 458 KMLCGRCHVHTDSNSFFID 476
>Z75550-8|CAA99926.1| 1307|Caenorhabditis elegans Hypothetical
protein T22C1.10a protein.
Length = 1307
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 614 QLLCHRCHFQTSSNGFIPD 670
++LC RCH T SN F D
Sbjct: 474 KMLCGRCHVHTDSNSFFID 492
>U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical
protein D1014.2 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 67 LVNFIHTHFNHISCFKSYS--IHLQFTFFVNVHKNTFLNIKCLCVVKFNS 210
+V+FIH + + Y IH+ F + + +T LNI +C ++ NS
Sbjct: 205 IVHFIHPKTRAANKYARYVVYIHMIFVVIIPMFLSTSLNILLVCALRKNS 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,499,173
Number of Sequences: 27780
Number of extensions: 290666
Number of successful extensions: 773
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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