Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0739
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.3  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   5.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   10.0 

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 395  LPIKLYLEQIFVCYYIKVVHV 333
            +P K Y+  IFVC+  K VH+
Sbjct: 1443 VPTKGYIS-IFVCFVTKAVHI 1462


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 252 LKKLFLFTAYLNIESKW 302
           L+K FLF AY++ + +W
Sbjct: 285 LEKEFLFNAYVSKQKRW 301


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 143 PRPPVTAAAMDSAGRLARERNAP 211
           P P  TAAAM +A  L+    AP
Sbjct: 777 PHPYYTAAAMAAASPLSLSSKAP 799


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,730
Number of Sequences: 2352
Number of extensions: 12188
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)