Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0738
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   0.77 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.5  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 321 HTLRYKF*GLKYSYNGCS 268
           H   Y F G  Y Y GCS
Sbjct: 13  HCFGYPFQGTTYKYTGCS 30


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 96  LFFFLSKTCFFKLYLSIMVIDMIITFTCGRTTCE 197
           L F L  +     Y+S +V  +I+   CGR   E
Sbjct: 283 LLFTLYSSLLLLDYVSCVVALIILILQCGRVRSE 316


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 96  LFFFLSKTCFFKLYLSIMVIDMIITFTCGRTTCE 197
           L F L  +     Y+S +V  +I+   CGR   E
Sbjct: 209 LLFTLYSSLLLLDYVSCVVALIILILQCGRVRSE 242


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 129 KLYLSIMVIDMIITFTCGRTTCESRRV 209
           ++YL    I   +TFTC R+   S ++
Sbjct: 15  QIYLQHNQIFGFVTFTCTRSNFRSSKL 41


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 129 KLYLSIMVIDMIITFTCGRTTCESRRV 209
           ++YL    I   +TFTC R+   S ++
Sbjct: 33  QIYLQHNQIFGFVTFTCTRSNFRSSKL 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,933
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)