Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0737
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047457-1|AAH47457.1|  798|Homo sapiens germ cell associated 2 ...    29   9.1  
BC016626-1|AAH16626.1|  773|Homo sapiens Unknown (protein for IM...    29   9.1  
AK056691-1|BAB71255.1|  314|Homo sapiens protein ( Homo sapiens ...    29   9.1  
AF289865-1|AAK30300.1|  798|Homo sapiens haploid germ cell-speci...    29   9.1  
AB039834-1|BAB21938.3|  798|Homo sapiens H-Haspin protein.             29   9.1  

>BC047457-1|AAH47457.1|  798|Homo sapiens germ cell associated 2
           (haspin) protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 18/40 (45%), Positives = 18/40 (45%)
 Frame = -2

Query: 452 LRARDXYTCQRPSARXFRFLPFLSRHVRRLSPSSSKSGAP 333
           LRAR    C  P     R  PF SR   RLSP  S  G P
Sbjct: 118 LRARPPQKCSTPCG-PLRLPPFPSRDSGRLSPDLSVCGQP 156


>BC016626-1|AAH16626.1|  773|Homo sapiens Unknown (protein for
           IMAGE:4524219) protein.
          Length = 773

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 18/40 (45%), Positives = 18/40 (45%)
 Frame = -2

Query: 452 LRARDXYTCQRPSARXFRFLPFLSRHVRRLSPSSSKSGAP 333
           LRAR    C  P     R  PF SR   RLSP  S  G P
Sbjct: 118 LRARPPQKCSTPCG-PLRLPPFPSRDSGRLSPDLSVCGQP 156


>AK056691-1|BAB71255.1|  314|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32129 fis, clone PEBLM2000213, weakly similar to
           Mus musculus genes for integrin aM290, hapsin. ).
          Length = 314

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 18/40 (45%), Positives = 18/40 (45%)
 Frame = -2

Query: 452 LRARDXYTCQRPSARXFRFLPFLSRHVRRLSPSSSKSGAP 333
           LRAR    C  P     R  PF SR   RLSP  S  G P
Sbjct: 118 LRARPPQKCSTPCG-PLRLPPFPSRDSGRLSPDLSVCGQP 156


>AF289865-1|AAK30300.1|  798|Homo sapiens haploid germ cell-specific
           nuclear protein kinase protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 18/40 (45%), Positives = 18/40 (45%)
 Frame = -2

Query: 452 LRARDXYTCQRPSARXFRFLPFLSRHVRRLSPSSSKSGAP 333
           LRAR    C  P     R  PF SR   RLSP  S  G P
Sbjct: 118 LRARPPQKCSTPCG-PLRLPPFPSRDSGRLSPDLSVCGQP 156


>AB039834-1|BAB21938.3|  798|Homo sapiens H-Haspin protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 18/40 (45%), Positives = 18/40 (45%)
 Frame = -2

Query: 452 LRARDXYTCQRPSARXFRFLPFLSRHVRRLSPSSSKSGAP 333
           LRAR    C  P     R  PF SR   RLSP  S  G P
Sbjct: 118 LRARPPQKCSTPCG-PLRLPPFPSRDSGRLSPDLSVCGQP 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,384,079
Number of Sequences: 237096
Number of extensions: 1762172
Number of successful extensions: 7353
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7353
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)