Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0733
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   1.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   1.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   1.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   1.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   1.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   1.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   1.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   1.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   1.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.3  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 72  LSTNGAPPRSTPPLSTPSNSNAT 94


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 14  VSCSAAGPDTTPPLSTRSQRRPT 82
           +S + A P +TPPLST S    T
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNAT 138


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 484 YINYLWIHFTCDHIVYTCFISF*VDFYLF 398
           Y  Y+ + F C  I++T  + F +  Y F
Sbjct: 260 YFYYMHLLFCCAFIIFTMHLLFLLCIYYF 288


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 299 LCT*IYIXNNDYFKITFIILLTTL 370
           LC  + +  ND+ ++ ++I ++TL
Sbjct: 894 LCVVLQLQENDWLQLGYLIFVSTL 917


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 627 NALEHIFAGKPKSVLCAKTPSFN 695
           NAL+H+F     S +C K    N
Sbjct: 196 NALDHLFLNDILSDICDKFEQIN 218


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 627 NALEHIFAGKPKSVLCAKTPSFN 695
           NAL+H+F     S +C K    N
Sbjct: 152 NALDHLFLNDILSDICDKFEQIN 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,133
Number of Sequences: 336
Number of extensions: 3515
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)