Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0733
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.         30   6.9  
AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane hel...    30   6.9  
AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.     30   6.9  

>AF307079-1|AAG27461.1| 1469|Homo sapiens lectomedin-2 protein.
          Length = 1469

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 26  AAGPDTTPPLSTRSQRRPTTI 88
           +AGP T+PPLST +  RPT +
Sbjct: 397 SAGPATSPPLSTTTTARPTPL 417


>AB065919-1|BAC06134.1| 1474|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1474

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 26  AAGPDTTPPLSTRSQRRPTTI 88
           +AGP T+PPLST +  RPT +
Sbjct: 402 SAGPATSPPLSTTTTARPTPL 422


>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
          Length = 1566

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 26  AAGPDTTPPLSTRSQRRPTTI 88
           +AGP T+PPLST +  RPT +
Sbjct: 494 SAGPATSPPLSTTTTARPTPL 514


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,365,704
Number of Sequences: 237096
Number of extensions: 1779827
Number of successful extensions: 3205
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3205
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)