Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0733
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p pro...    29   4.6  
AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA...    29   4.6  
Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class u...    29   8.0  
BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p pro...    29   8.0  
AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V pro...    29   8.0  
AE013599-435|AAM68903.1| 1196|Drosophila melanogaster CG2146-PB,...    29   8.0  
AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,...    29   8.0  
AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,...    29   8.0  

>AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p
           protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 200 CKKTKFKNGRPM*IRNRWKCERRRAFGWSRITK 102
           CKK   K+   + +  +W  E+ +  GWS+ TK
Sbjct: 46  CKKALEKHNNDVGLAEKWLHEQAQTLGWSKATK 78


>AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA
           protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 200 CKKTKFKNGRPM*IRNRWKCERRRAFGWSRITK 102
           CKK   K+   + +  +W  E+ +  GWS+ TK
Sbjct: 46  CKKALEKHNNDVGLAEKWLHEQAQTLGWSKATK 78


>Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class
           unconventional myosin protein.
          Length = 1745

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 RISNGSEFTWAGHF*ILFFCNKFPKRTYPRY 232
           R+  GS+ +WAG   ++  CNKFP    PR+
Sbjct: 477 RMPKGSDESWAGK--LIGKCNKFPHFEKPRF 505


>BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p
           protein.
          Length = 1401

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 RISNGSEFTWAGHF*ILFFCNKFPKRTYPRY 232
           R+  GS+ +WAG   ++  CNKFP    PR+
Sbjct: 524 RMPKGSDESWAGK--LIGKCNKFPHFEKPRF 552


>AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V
           protein.
          Length = 1792

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 RISNGSEFTWAGHF*ILFFCNKFPKRTYPRY 232
           R+  GS+ +WAG   ++  CNKFP    PR+
Sbjct: 524 RMPKGSDESWAGK--LIGKCNKFPHFEKPRF 552


>AE013599-435|AAM68903.1| 1196|Drosophila melanogaster CG2146-PB,
           isoform B protein.
          Length = 1196

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 RISNGSEFTWAGHF*ILFFCNKFPKRTYPRY 232
           R+  GS+ +WAG   ++  CNKFP    PR+
Sbjct: 524 RMPKGSDESWAGK--LIGKCNKFPHFEKPRF 552


>AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,
           isoform A protein.
          Length = 1792

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 RISNGSEFTWAGHF*ILFFCNKFPKRTYPRY 232
           R+  GS+ +WAG   ++  CNKFP    PR+
Sbjct: 524 RMPKGSDESWAGK--LIGKCNKFPHFEKPRF 552


>AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,
           isoform C protein.
          Length = 1800

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 RISNGSEFTWAGHF*ILFFCNKFPKRTYPRY 232
           R+  GS+ +WAG   ++  CNKFP    PR+
Sbjct: 524 RMPKGSDESWAGK--LIGKCNKFPHFEKPRF 552


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,647,241
Number of Sequences: 53049
Number of extensions: 552870
Number of successful extensions: 1192
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)