Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0733
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.8  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 117 PAKRTPPLAFPTVPNLHGPAIFEF 188
           PA RTP  + P +  +HG A F+F
Sbjct: 113 PADRTPSQSLPVIFWIHGGA-FQF 135


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 117 PAKRTPPLAFPTVPNLHGPAIFEF 188
           PA RTP  + P +  +HG A F+F
Sbjct: 113 PADRTPSQSLPVIFWIHGGA-FQF 135


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/46 (19%), Positives = 24/46 (52%)
 Frame = -1

Query: 285 VYTQLTFFL*AAIFEKKQYRGYVRFGNLLQKNKIQKWPAHVNSEPL 148
           +YT+ +    ++ +++ +    +    L   NK+Q+W   +N +P+
Sbjct: 67  IYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPI 112


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/46 (19%), Positives = 24/46 (52%)
 Frame = -1

Query: 285 VYTQLTFFL*AAIFEKKQYRGYVRFGNLLQKNKIQKWPAHVNSEPL 148
           +YT+ +    ++ +++ +    +    L   NK+Q+W   +N +P+
Sbjct: 82  IYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPI 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,271
Number of Sequences: 438
Number of extensions: 4079
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)