Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0731
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p pro...    40   0.003
AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA...    40   0.003
BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p pro...    30   2.8  
AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA...    30   2.8  

>AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p
           protein.
          Length = 215

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
 Frame = +3

Query: 21  KGVSGLIEVENPNRV-------VXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXY 179
           KGV+ LIE+ENPNRV       +            G   KP+LS               Y
Sbjct: 106 KGVASLIEIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRY 165

Query: 180 QKLHAEGKTEQXXXXXXXXXXXXQQAKKQLSAERQRKNLKKILQLKK 320
           +KLHA GKT +            QQ +++ +A+R+ +     +  KK
Sbjct: 166 EKLHAAGKTTEAKADLARLALIRQQ-REEAAAKREAEKKAADVGTKK 211


>AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA
           protein.
          Length = 215

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
 Frame = +3

Query: 21  KGVSGLIEVENPNRV-------VXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXY 179
           KGV+ LIE+ENPNRV       +            G   KP+LS               Y
Sbjct: 106 KGVASLIEIENPNRVTKKATQKLSAIKLDDGPAGAGGNPKPELSRREREQIEKQRARQRY 165

Query: 180 QKLHAEGKTEQXXXXXXXXXXXXQQAKKQLSAERQRKNLKKILQLKK 320
           +KLHA GKT +            QQ +++ +A+R+ +     +  KK
Sbjct: 166 EKLHAAGKTTEAKADLARLALIRQQ-REEAAAKREAEKKAADVGTKK 211


>BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p
           protein.
          Length = 189

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 25/99 (25%), Positives = 36/99 (36%)
 Frame = +3

Query: 21  KGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEG 200
           KGV+ LIE++NPNRV              D  K  LS               Y+KLH  G
Sbjct: 92  KGVASLIEIDNPNRVSKKGPQKISAIML-DQTKAGLS----RRDQDQSARKRYEKLHVAG 146

Query: 201 KTEQXXXXXXXXXXXXQQAKKQLSAERQRKNLKKILQLK 317
           KT +            +Q ++  +     K    ++  K
Sbjct: 147 KTTEARADLARLALIRKQREETAARREAEKKAANVVTKK 185


>AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA
           protein.
          Length = 189

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 25/99 (25%), Positives = 36/99 (36%)
 Frame = +3

Query: 21  KGVSGLIEVENPNRVVXXXXXXXXXXXXGDVEKPQLSXXXXXXXXXXXXXXXYQKLHAEG 200
           KGV+ LIE++NPNRV              D  K  LS               Y+KLH  G
Sbjct: 92  KGVASLIEIDNPNRVSKKGPQKISAIML-DQTKAGLS----RRDQDQSARKRYEKLHVAG 146

Query: 201 KTEQXXXXXXXXXXXXQQAKKQLSAERQRKNLKKILQLK 317
           KT +            +Q ++  +     K    ++  K
Sbjct: 147 KTTEARADLARLALIRKQREETAARREAEKKAANVVTKK 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,317,688
Number of Sequences: 53049
Number of extensions: 331345
Number of successful extensions: 491
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)