Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0729
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;... 36 0.72
UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n... 36 1.3
UniRef50_UPI000069DB5B Cluster: UPI000069DB5B related cluster; n... 35 2.2
UniRef50_Q385V7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n... 34 2.9
UniRef50_Q4X807 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_A5K3X4 Cluster: Gamma-tubulin complex component, putati... 34 2.9
UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n... 34 3.9
UniRef50_Q6ZSJ0 Cluster: CDNA FLJ45488 fis, clone BRTHA2003759; ... 34 3.9
UniRef50_UPI0000F2E7D9 Cluster: PREDICTED: similar to polyprotei... 33 5.1
UniRef50_Q2AGX3 Cluster: Glycogen debranching enzyme, archaeal t... 33 5.1
UniRef50_Q8IL35 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n... 33 6.7
UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -... 33 6.7
UniRef50_Q8IBZ3 Cluster: Putative uncharacterized protein MAL7P1... 33 6.7
UniRef50_A7EAP2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_UPI000155C660 Cluster: PREDICTED: similar to SJCHGC0197... 33 8.9
UniRef50_UPI0000DD8177 Cluster: PREDICTED: hypothetical protein;... 33 8.9
UniRef50_UPI0000DC0A8F Cluster: UPI0000DC0A8F related cluster; n... 33 8.9
UniRef50_Q8IIT8 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
UniRef50_Q4XP80 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_A7S6D0 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.9
UniRef50_Q8WYZ9 Cluster: Putative uncharacterized protein; n=2; ... 33 8.9
>UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 182
Score = 36.3 bits (80), Expect = 0.72
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = -2
Query: 153 ILSYKYTQKNIYTYNFILHKYIHTFIHAHINIIVYTVLKGIYYYI 19
IL Y YT IYTY +I + Y +T+I+ + I +YT + Y Y+
Sbjct: 45 ILIYTYTFTYIYTYTYI-YTYTYTYIYIYTYIYIYTYI-NTYTYV 87
>UniRef50_UPI0000DC1FED Cluster: UPI0000DC1FED related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1FED UniRef100 entry -
Rattus norvegicus
Length = 239
Score = 35.5 bits (78), Expect = 1.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 147 SYKYTQKNIYTYNFILHKYIHTFIHAHINIIVY 49
+Y + ++YT+ I++ ++HT IH H++I Y
Sbjct: 95 TYMHIHTHMYTHTHIIYMHVHTHIHTHVHIHTY 127
Score = 35.1 bits (77), Expect = 1.7
Identities = 9/34 (26%), Positives = 25/34 (73%)
Frame = +3
Query: 69 VHV*MCVCIYVK*NYMYIYFFVYICNLI*ISLHL 170
+++ +C+C+Y+ Y+YIY ++Y+C + + +++
Sbjct: 140 IYMHICICVYMYYIYIYIYIYIYMCVCVNVCMYV 173
>UniRef50_UPI000069DB5B Cluster: UPI000069DB5B related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069DB5B UniRef100 entry -
Xenopus tropicalis
Length = 372
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -2
Query: 147 SYKYTQKNIYTYNFILHKYIHTFIHAHINIIVYTVL 40
++ +T +I+T+ +I H YIHT+IH H + +T +
Sbjct: 1 THTHTHTHIHTHTYI-HTYIHTYIHTHTHTHTHTYI 35
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 147 SYKYTQKNIYTYNFI-LHKYIHTFIHAHINIIVY 49
++ +T I+T+ + H YIHT+ H H NI Y
Sbjct: 27 THTHTHTYIHTHTYTHTHAYIHTYTHTHTNIHTY 60
Score = 32.7 bits (71), Expect = 8.9
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 156 FILSYKYTQKNIYTY-NFILHKYIHTFIHAHINIIVYTVL 40
+I +Y +T NI+TY + +H + HT IH + +I +T +
Sbjct: 46 YIHTYTHTHTNIHTYLHTHIHTHTHTHIHTYTHIHTHTYI 85
>UniRef50_Q385V7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 163
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 111 YMYIYFFVYICNLI*ISLHLPLFTLHYLWL 200
Y+YIY F+Y+C L+ SL P F L Y L
Sbjct: 74 YIYIYLFIYLCMLVFSSLPSPFFFLLYFVL 103
>UniRef50_UPI0000DBFC45 Cluster: UPI0000DBFC45 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFC45 UniRef100 entry -
Rattus norvegicus
Length = 272
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 8/36 (22%)
Frame = +2
Query: 59 IFICACMNVCMYLCK--------IKLYVYIFFCVYL 142
++IC M+V MY+C + +YVYIF CVYL
Sbjct: 50 LYICLLMHVYMYMCMYIVYLCVYVCIYVYIFMCVYL 85
>UniRef50_Q4X807 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 104
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +2
Query: 59 IFICACMNVCMYLCKIK-LYVYIFFCVYL 142
+++ CM VC+Y+C +YVY+ CVY+
Sbjct: 75 VYVYVCMCVCVYICMCAYMYVYMCVCVYV 103
Score = 33.5 bits (73), Expect = 5.1
Identities = 11/28 (39%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 59 IFICACMNVCMYLCK-IKLYVYIFFCVY 139
I++C CM +C+Y+C + + V ++ CVY
Sbjct: 15 IYVCVCMYICVYVCVCVCMCVCMYVCVY 42
>UniRef50_A5K3X4 Cluster: Gamma-tubulin complex component, putative;
n=4; Plasmodium|Rep: Gamma-tubulin complex component,
putative - Plasmodium vivax
Length = 1862
Score = 34.3 bits (75), Expect = 2.9
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 141 KYTQKNIYTYNFILHKYIHTFIHAHINIIVYTVLKGIYYYILSL 10
K NI Y F ++K IH F+++ I II V G Y+Y++++
Sbjct: 29 KENNLNIDEYCFEVNKNIHIFLNSEIKIINEIVQLGYYFYVMNV 72
>UniRef50_UPI0000DBFFED Cluster: UPI0000DBFFED related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DBFFED UniRef100 entry -
Rattus norvegicus
Length = 280
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 144 YKYTQKNIYTYNFILHKYIHTFIHAHI-NIIVYTVLKGIYYYI 19
Y YT IYT+ ++ Y H +I+ H NI +YT IY YI
Sbjct: 185 YIYTHIYIYTHTHTIYIYTHIYIYTHTHNIYIYT---HIYIYI 224
>UniRef50_Q6ZSJ0 Cluster: CDNA FLJ45488 fis, clone BRTHA2003759;
n=2; Homo sapiens|Rep: CDNA FLJ45488 fis, clone
BRTHA2003759 - Homo sapiens (Human)
Length = 130
Score = 33.9 bits (74), Expect = 3.9
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 111 YMYIYFFVYICNLI*ISLHLPLFTLHYLWL 200
Y+YI+ ++YIC I + ++L +FT Y++L
Sbjct: 46 YLYIFIYIYICLYIYLYIYLYIFTYIYIYL 75
>UniRef50_UPI0000F2E7D9 Cluster: PREDICTED: similar to polyprotein;
n=5; Monodelphis domestica|Rep: PREDICTED: similar to
polyprotein - Monodelphis domestica
Length = 1399
Score = 33.5 bits (73), Expect = 5.1
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = -1
Query: 664 LHRAPHQCENLIIIIAVCS-----PXEFNASS*IANSKTAIKAVWXVLTQGYTEKNTFIL 500
L++ PH + + ++ +CS P ++ A + I+ W VL QGYTE T+
Sbjct: 457 LNQIPHSAK-IFTVVDLCSAYFSVPLHADSQFLFAFTWEGIQLCWTVLLQGYTESATYFS 515
Query: 499 FMLPYTLIDGFFWFNPSVIAQLIRDVTNCA 410
+L L F F S + Q + D+ C+
Sbjct: 516 QVLKADLAGLKFPFG-STLLQYVDDLLLCS 544
>UniRef50_Q2AGX3 Cluster: Glycogen debranching enzyme, archaeal
type; n=1; Halothermothrix orenii H 168|Rep: Glycogen
debranching enzyme, archaeal type - Halothermothrix
orenii H 168
Length = 661
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 159 KFILSYKYTQKNIYTY---NFILHKYIHTFIHAHINIIVYTVLKGIYYYILSLQP 4
KF+LS++Y +Y Y +F++ K I +I ++ Y +L G + +L L P
Sbjct: 91 KFLLSFRYKPYPVYVYSYKSFLIKKSIFMVPGKNITVVHYHILDGDFPALLELTP 145
>UniRef50_Q8IL35 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1898
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 126 NIYTYNFILHKYIHTFIHAHINIIVYTVLKGIYYYILSL 10
NI Y F ++ IH F+++ I II V G Y+YI+++
Sbjct: 33 NIDDYRFEVNNNIHIFLNSEIKIINEIVELGYYFYIINI 71
>UniRef50_UPI0000DC0080 Cluster: UPI0000DC0080 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0080 UniRef100 entry -
Rattus norvegicus
Length = 294
Score = 33.1 bits (72), Expect = 6.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 59 IFICACMNVCMYLCKIKLYVYIFFCVYL 142
+++C CM VC+ +C +YV ++ CVY+
Sbjct: 158 VYVCVCMWVCVCVC---MYVCVYVCVYV 182
>UniRef50_Q9QJ59 Cluster: B4; n=1; Human herpesvirus 6B|Rep: B4 -
Human herpesvirus 6B
Length = 193
Score = 33.1 bits (72), Expect = 6.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 59 IFICACMNVCMYLCKIKLYVYIFFCVYL*LNINFI 163
+F C C+ +C++ C + +V +FFCV + + F+
Sbjct: 23 VFFCVCIFLCVFFC-VYFFVCVFFCVCFFVCVFFV 56
>UniRef50_Q8IBZ3 Cluster: Putative uncharacterized protein MAL7P1.28;
n=3; Plasmodium|Rep: Putative uncharacterized protein
MAL7P1.28 - Plasmodium falciparum (isolate 3D7)
Length = 1192
Score = 33.1 bits (72), Expect = 6.7
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = -2
Query: 303 SLFLYQHNAKSNWYLLKSCKVYIGGLNA*GILYQSTKGSAE*IVVGAMKFILSYKYTQKN 124
S +L+ HN ++ + LK CK+ I +LY ST + MK + Y Y
Sbjct: 1094 SFYLFLHNLLNHLFALKLCKILIIKKKKKSVLYVSTN-------LNIMKGFIRYYYFNV- 1145
Query: 123 IYTYNFILHKYIHTFIHAHINI 58
IY + F +I T +IN+
Sbjct: 1146 IYNFFFFFLNFIVTQQEININV 1167
>UniRef50_A7EAP2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 954
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -2
Query: 177 IVVGAMKFILSYKYTQKNIYTYNFILHKYIHTFIHAHINIIVYTVL 40
+++ + + L NI+TYNF++ K +H H IIV + L
Sbjct: 319 LILAKICYNLLISSVSPNIFTYNFLIEKLTELMLHDHAQIIVDSFL 364
>UniRef50_UPI000155C660 Cluster: PREDICTED: similar to SJCHGC01974
protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to SJCHGC01974 protein - Ornithorhynchus
anatinus
Length = 438
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = +2
Query: 56 IIFICACMNVCMYL-CKIKLY--VYIFFCVYL 142
++ +C C+ VC+Y+ I LY VYI FC+YL
Sbjct: 233 LLLMCVCVCVCIYIFIYIFLYPSVYISFCIYL 264
>UniRef50_UPI0000DD8177 Cluster: PREDICTED: hypothetical protein;
n=3; Tetrapoda|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 498
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -2
Query: 138 YTQKNIYTYNFIL-HKYIHTFIHAHINIIVYTVL 40
YT + YT+ I H +I+T+IHA+++I +YT L
Sbjct: 251 YTHIHAYTHIHIYTHIHIYTYIHAYVHIHIYTHL 284
>UniRef50_UPI0000DC0A8F Cluster: UPI0000DC0A8F related cluster; n=4;
Tetrapoda|Rep: UPI0000DC0A8F UniRef100 entry - Rattus
norvegicus
Length = 131
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Frame = +2
Query: 59 IFIC--ACMNVCMYLC-KIKLYVYIFFCVYL 142
+++C ACM VCMY+C + +Y+ I+ +YL
Sbjct: 95 MYVCMYACMYVCMYVCIYLSIYLSIYLSIYL 125
>UniRef50_Q8IIT8 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1988
Score = 32.7 bits (71), Expect = 8.9
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = -2
Query: 150 LSYKYTQKNIYTYNFILHKYIHTFIHAHINIIVYTVLKGIY 28
+++ +K I+ YN ++ K++H+F + + I Y+++ IY
Sbjct: 1936 INFVQVEKLIFQYNMVVKKFLHSFNYIYHIIDTYSLISNIY 1976
>UniRef50_Q4XP80 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 73
Score = 32.7 bits (71), Expect = 8.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 74 CMNVCMYLCKIKLYVYIFFCVYL 142
CM +CMY+C +Y+Y++ C Y+
Sbjct: 12 CMYICMYVC---MYIYMYVCTYI 31
>UniRef50_A7S6D0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 95
Score = 32.7 bits (71), Expect = 8.9
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -2
Query: 156 FILSYKYTQKNIYTY---NFILHKYIHTFIHAHINIIVYTVLKGIYY-YIL 16
FI +Y YTY F + YIHT HI I Y+VL +Y YIL
Sbjct: 12 FIHTYSVLLPYFYTYILCAFAIFLYIHTLCFCHIFIHTYSVLLPYFYTYIL 62
>UniRef50_Q8WYZ9 Cluster: Putative uncharacterized protein; n=2;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 135
Score = 32.7 bits (71), Expect = 8.9
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -2
Query: 165 AMKFILSYKYTQKNIYTYNFI-----LHKYIHTFIHAHINIIVY 49
++++I Y +T + Y Y +I H Y HT+IH HI I +
Sbjct: 89 SLRYIDIYTHTHTHTYIYTYIHIYVYTHIYTHTYIHTHICIYTH 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,494,149
Number of Sequences: 1657284
Number of extensions: 10805104
Number of successful extensions: 27234
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26257
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -