Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0729
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    34   0.56 
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    32   1.7  
BC027448-1|AAH27448.1|   85|Homo sapiens Unknown (protein for MG...    32   2.3  
AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    32   2.3  
AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    31   4.0  
AY233133-1|AAP74658.1|  292|Homo sapiens GnRH receptor II protein.     30   6.9  
AY081843-1|AAL89821.1|  292|Homo sapiens GnRH receptor II 5TM pr...    30   6.9  
AF403014-1|AAL27000.1|  379|Homo sapiens type II gonadotropin-re...    30   6.9  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 111 YMYIYFFVYICNLI*ISLHLPLFTLHYLWL 200
           Y+YI+ ++YIC  I + ++L +FT  Y++L
Sbjct: 46  YLYIFIYIYICLYIYLYIYLYIFTYIYIYL 75


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 144 YKYTQKNIYTYNFI-LHKYIHTFIHAHINIIVY 49
           Y YT   IYTY  + +  Y HT+IH H+ + V+
Sbjct: 18  YVYTHTYIYTYTCMYVCIYSHTYIHTHVYVCVH 50


>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 144 YKYTQKNIYTYNFILHKYIHTFIHAHINIIVYTVL 40
           + YT K++Y Y +I + Y +T++  HI+I V+  L
Sbjct: 46  HMYTHKHMYVYTYI-YVYTYTYVCVHIHICVHIYL 79



 Score = 30.7 bits (66), Expect = 5.2
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
 Frame = -2

Query: 144 YKYTQKNIYTYNFI-----------LHKYIHTFIHAHINIIVYTVLKGIYYYI 19
           Y YT   +YTY ++           L  Y HT++ AHI++ VYT    IY YI
Sbjct: 54  YVYTYIYVYTYTYVCVHIHICVHIYLCMYTHTYMCAHIHMCVYTY---IYVYI 103


>BC027448-1|AAH27448.1|   85|Homo sapiens Unknown (protein for
           MGC:34919) protein.
          Length = 85

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 138 YTQKNIYTYNFILHKYIHTFIHAHINIIVY 49
           Y   + YT+++I++ Y HT  H H ++ V+
Sbjct: 43  YIYTHTYTHDYIVYVYTHTHTHTHTHVFVH 72


>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 59  IFICACMNVCMYLCKIKLYVYIFFCVYL 142
           +F+C C+ VC+ +C + + V I  CVYL
Sbjct: 47  VFVCVCICVCVCVC-VSMCVSISVCVYL 73


>AK095631-1|BAC04594.1|  134|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38312 fis, clone FCBBF3021506. ).
          Length = 134

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 56  IIFICACMNVCMYLCKIKLYVYIFFCVYL 142
           +I +C C+ VC ++C   ++VY+  CV L
Sbjct: 41  VICVCVCVFVCAHMCSC-VFVYVCICVCL 68



 Score = 30.7 bits (66), Expect = 5.2
 Identities = 9/29 (31%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +2

Query: 59  IFICACMNVCMYLCK-IKLYVYIFFCVYL 142
           +F+  C+ VC+Y+C  + + +Y++ CV++
Sbjct: 58  VFVYVCICVCLYVCVFVCVCMYVYLCVFV 86



 Score = 30.7 bits (66), Expect = 5.2
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = +2

Query: 59  IFICACMNVCMYLCKIKLYVY--IFFCVYL 142
           + IC C+ VC+++C + +YVY  +F C+ L
Sbjct: 62  VCICVCLYVCVFVC-VCMYVYLCVFVCMCL 90


>AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31338 fis, clone MAMGL1000184. ).
          Length = 181

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +2

Query: 53  TIIFICACMNVCMYLCKIKLYVYIFFCV 136
           T++ +CACM VC+++C     VY+  CV
Sbjct: 125 TVVCMCACMCVCVHVCAC---VYVCMCV 149


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 156 FILSYKYTQKNIYTYNFI-LHKYIHTFIHAHINIIVYTVLKGIYYYI 19
           FI ++ +T   +Y+Y  I +H Y+H   +A+I I +YT +   Y YI
Sbjct: 60  FICTHMHTY--VYSYTRICIHMYVHIHAYAYICIFIYTHMH-TYMYI 103



 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 53  TIIFICACMNVCMYLCKIKLYVYIFFCVYL 142
           T + +C  M  C++ C I +Y Y++ CVY+
Sbjct: 182 TCMHMCIHMYTCIHRC-IFIYTYVYICVYI 210


>AY233133-1|AAP74658.1|  292|Homo sapiens GnRH receptor II protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -1

Query: 511 TFILFMLPYTLIDGFFWFNPSVIAQL 434
           TFIL   PY L+  ++WF+P+++ ++
Sbjct: 185 TFILCWTPYYLLGMWYWFSPTMLTEV 210


>AY081843-1|AAL89821.1|  292|Homo sapiens GnRH receptor II 5TM
           protein.
          Length = 292

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -1

Query: 511 TFILFMLPYTLIDGFFWFNPSVIAQL 434
           TFIL   PY L+  ++WF+P+++ ++
Sbjct: 185 TFILCWTPYYLLGMWYWFSPTMLTEV 210


>AF403014-1|AAL27000.1|  379|Homo sapiens type II
           gonadotropin-releasing hormone receptor protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -1

Query: 511 TFILFMLPYTLIDGFFWFNPSVIAQL 434
           TFIL   PY L+  ++WF+P+++ ++
Sbjct: 272 TFILCWTPYYLLGMWYWFSPTMLTEV 297


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -2

Query: 177 IVVGAMKFILSYKYTQKNIYTYNFI---LHKYIHTFIHAHINIIVYT 46
           I + A  +I  Y YT+  I+   FI   +H Y++  IHA+  I VY+
Sbjct: 49  IHIHAYAYIYVYSYTRICIHICIFIYTHMHTYMYIHIHAYAYIYVYS 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,263,823
Number of Sequences: 237096
Number of extensions: 1630365
Number of successful extensions: 2779
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2694
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)