Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0729
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060347-1|AAL25386.1|  118|Drosophila melanogaster GH26867p pro...    29   4.6  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    29   4.6  
AE013599-1119|AAF58781.3|  878|Drosophila melanogaster CG12052-P...    29   4.6  
AE013599-1118|AAS64875.1|  577|Drosophila melanogaster CG12052-P...    29   4.6  
AB107349-1|BAC67654.1|  577|Drosophila melanogaster Lola protein...    29   4.6  
AB107329-1|BAC67634.1|  577|Drosophila melanogaster Lola protein...    29   4.6  
AB107309-1|BAC67614.1|  577|Drosophila melanogaster Lola protein...    29   4.6  
AB107289-1|BAC67594.1|  577|Drosophila melanogaster Lola protein...    29   4.6  

>AY060347-1|AAL25386.1|  118|Drosophila melanogaster GH26867p
           protein.
          Length = 118

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 378 LGHVSLGYYYLAQFVTSLISCAITLGLNQKKPSIRVYGNIK 500
           L ++ +G+Y L    TSL+SC   +GL  ++ SI    ++K
Sbjct: 78  LSNIVIGWYKLFG-TTSLVSCPTNIGLGSRRSSIASLDSLK 117


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
            protein.
          Length = 2938

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 378  LGHVSLGYYYLAQFVTSLISCAITLGLNQKKPSIRVYGNIK 500
            L ++ +G+Y L    TSL+SC   +GL  ++ SI    ++K
Sbjct: 2898 LSNIVIGWYKLFG-TTSLVSCPTNIGLGSRRSSIASLDSLK 2937


>AE013599-1119|AAF58781.3|  878|Drosophila melanogaster CG12052-PN,
           isoform N protein.
          Length = 878

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 248 QDFNKYQLDFALCWYKNR 301
           QDF ++Q DF L W+K R
Sbjct: 789 QDFKRFQCDFCLKWFKRR 806


>AE013599-1118|AAS64875.1|  577|Drosophila melanogaster CG12052-PY,
           isoform Y protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 248 QDFNKYQLDFALCWYKNR 301
           QDF ++Q DF L W+K R
Sbjct: 488 QDFKRFQCDFCLKWFKRR 505


>AB107349-1|BAC67654.1|  577|Drosophila melanogaster Lola protein
           isoform R protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 248 QDFNKYQLDFALCWYKNR 301
           QDF ++Q DF L W+K R
Sbjct: 488 QDFKRFQCDFCLKWFKRR 505


>AB107329-1|BAC67634.1|  577|Drosophila melanogaster Lola protein
           isoform R protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 248 QDFNKYQLDFALCWYKNR 301
           QDF ++Q DF L W+K R
Sbjct: 488 QDFKRFQCDFCLKWFKRR 505


>AB107309-1|BAC67614.1|  577|Drosophila melanogaster Lola protein
           isoform R protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 248 QDFNKYQLDFALCWYKNR 301
           QDF ++Q DF L W+K R
Sbjct: 488 QDFKRFQCDFCLKWFKRR 505


>AB107289-1|BAC67594.1|  577|Drosophila melanogaster Lola protein
           isoform R protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 248 QDFNKYQLDFALCWYKNR 301
           QDF ++Q DF L W+K R
Sbjct: 488 QDFKRFQCDFCLKWFKRR 505


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,627,558
Number of Sequences: 53049
Number of extensions: 489652
Number of successful extensions: 909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)