Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0728
(669 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 25 2.9
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 25 2.9
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 24 3.8
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 24 3.8
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 24 3.8
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 24 3.8
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 24 3.8
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 24 3.8
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 24 5.0
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 23 6.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 8.7
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA++ G +HAAP
Sbjct: 26 GSIATSHSTIQHHAAPAIQHVGSVHAAP 53
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIASSHSTIQHHAAPAIHHVGSVHAAP 53
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSTIQHHAAPAIHHVGSVHAAP 53
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSTIQHHAAPAIHHVGSVHAAP 53
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSTIQHHAAPAIHHVGSVHAAP 53
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSTIQHHAAPAIHHVGSVHAAP 53
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSTIQHHAAPAIHHVGSVHAAP 53
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 24.2 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA++ G +HAAP
Sbjct: 26 GSIATSHSTIQHHARPAIQHVGSIHAAP 53
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSSIQHHAAPAIHHVGSIHAAP 53
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 23.4 bits (48), Expect = 6.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 107 GCCAQQHDVPPRARGPAVRQQGQLHAAP 190
G A H PA+ G +HAAP
Sbjct: 26 GSIATSHSSIQHHAAPAIHHVGSVHAAP 53
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 271 AHLHVHGIPSSGSEFAADPTAHQQ 342
AH G P S + +A DPT ++Q
Sbjct: 1776 AHPSCEGFPYSRTIYANDPTENKQ 1799
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,073
Number of Sequences: 2352
Number of extensions: 13035
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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