Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0728
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein. 55 8e-08
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 55 8e-08
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 55 8e-08
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 55 8e-08
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 55 8e-08
AY119515-1|AAM50169.1| 494|Drosophila melanogaster GH14048p pro... 29 7.6
AE014297-2491|AAF55530.2| 494|Drosophila melanogaster CG7131-PA... 29 7.6
AY060727-1|AAL28275.1| 466|Drosophila melanogaster GH17442p pro... 28 10.0
AF273708-1|AAL35411.1| 118|Drosophila melanogaster PFTAIRE-inte... 28 10.0
AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA... 28 10.0
AE013599-1056|AAF58817.2| 466|Drosophila melanogaster CG12910-P... 28 10.0
>U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein.
Length = 186
Score = 55.2 bits (127), Expect = 8e-08
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 EQVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSF 179
++V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F
Sbjct: 61 QEVLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTF 118
Query: 180 MLLLDFAEERLGCKSCIICVLKSRP 254
+ LL+FAEE+L ++ + K +P
Sbjct: 119 ISLLEFAEEKLEVDGIVMVMPKDQP 143
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 242 EESSHRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 364
++ RA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 140 KDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 182
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 55.2 bits (127), Expect = 8e-08
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 EQVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSF 179
++V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F
Sbjct: 129 QEVLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTF 186
Query: 180 MLLLDFAEERLGCKSCIICVLKSRP 254
+ LL+FAEE+L ++ + K +P
Sbjct: 187 ISLLEFAEEKLEVDGIVMVMPKDQP 211
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 242 EESSHRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 364
++ RA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 208 KDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 55.2 bits (127), Expect = 8e-08
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 EQVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSF 179
++V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F
Sbjct: 123 QEVLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTF 180
Query: 180 MLLLDFAEERLGCKSCIICVLKSRP 254
+ LL+FAEE+L ++ + K +P
Sbjct: 181 ISLLEFAEEKLEVDGIVMVMPKDQP 205
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 242 EESSHRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 364
++ RA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 202 KDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 244
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 55.2 bits (127), Expect = 8e-08
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 EQVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSF 179
++V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F
Sbjct: 145 QEVLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTF 202
Query: 180 MLLLDFAEERLGCKSCIICVLKSRP 254
+ LL+FAEE+L ++ + K +P
Sbjct: 203 ISLLEFAEEKLEVDGIVMVMPKDQP 227
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 242 EESSHRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 364
++ RA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 224 KDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 266
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 55.2 bits (127), Expect = 8e-08
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 EQVVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSF 179
++V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F
Sbjct: 129 QEVLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTF 186
Query: 180 MLLLDFAEERLGCKSCIICVLKSRP 254
+ LL+FAEE+L ++ + K +P
Sbjct: 187 ISLLEFAEEKLEVDGIVMVMPKDQP 211
Score = 34.7 bits (76), Expect = 0.12
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 242 EESSHRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 364
++ RA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 208 KDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
>AY119515-1|AAM50169.1| 494|Drosophila melanogaster GH14048p
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 228 CNSYSRDALQ--RNPGAA*SCPCCRTAGPRARGGTSCCCAQQPP 103
CN+Y ++A + P CP T P G + CC QQPP
Sbjct: 5 CNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPP 48
>AE014297-2491|AAF55530.2| 494|Drosophila melanogaster CG7131-PA,
isoform A protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -1
Query: 228 CNSYSRDALQ--RNPGAA*SCPCCRTAGPRARGGTSCCCAQQPP 103
CN+Y ++A + P CP T P G + CC QQPP
Sbjct: 5 CNTYCQNACDPCQAPTDFSPCPPNSTCPPCDCGDYAGCCYQQPP 48
>AY060727-1|AAL28275.1| 466|Drosophila melanogaster GH17442p
protein.
Length = 466
Score = 28.3 bits (60), Expect = 10.0
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 AREQVVNKILERKDKHPVKIE-FKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQSGSKD 173
A V+N++L + K +E Y+ V+ A+V N+ +Y PG
Sbjct: 354 APSHVLNRLLYTQSKVRRTLEVLPAYIRSKVVVNARAIVEMGNHQVYRAAPGYADHVVHP 413
Query: 174 SFMLLLDFAEERLGCKSCII 233
+ LL + ++ + CK +I
Sbjct: 414 TVGLLFHYRDKCINCKMVLI 433
>AF273708-1|AAL35411.1| 118|Drosophila melanogaster
PFTAIRE-interacting factor 2 protein.
Length = 118
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +3
Query: 216 CKSCI-ICVLKSRPTALPCCAPSCS 287
CK C CV P PCC P C+
Sbjct: 70 CKCCTPCCVPCCTPCCTPCCTPCCT 94
>AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA
protein.
Length = 118
Score = 28.3 bits (60), Expect = 10.0
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +3
Query: 216 CKSCI-ICVLKSRPTALPCCAPSCS 287
CK C CV P PCC P C+
Sbjct: 70 CKCCTPCCVPCCTPCCTPCCTPCCT 94
>AE013599-1056|AAF58817.2| 466|Drosophila melanogaster CG12910-PA
protein.
Length = 466
Score = 28.3 bits (60), Expect = 10.0
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 3 AREQVVNKILERKDKHPVKIE-FKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQSGSKD 173
A V+N++L + K +E Y+ V+ A+V N+ +Y PG
Sbjct: 354 APSHVLNRLLYTQSKVRRTLEVLPAYIRSKVVVNARAIVEMGNHQVYRAAPGYADHVVHP 413
Query: 174 SFMLLLDFAEERLGCKSCII 233
+ LL + ++ + CK +I
Sbjct: 414 TVGLLFHYRDKCINCKMVLI 433
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,908,061
Number of Sequences: 53049
Number of extensions: 574454
Number of successful extensions: 1683
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1673
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -