Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0727
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7TJX2 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_A7EGP5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_A7TJX2 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 367

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +3

Query: 270 KMHYFIPNLLKIYNY*INSSAILFYPLLYHFVILVVTYYSDSQVSLCPSYKISIGKTIYD 449
           + H  +P  + +YNY I  +    Y  L H V+L   YY D   S+ P +KI+   T++ 
Sbjct: 99  RFHSRVPPNISVYNYLIRLTK---YSSLEHCVLLSTVYYIDLLSSVYPEFKIN-SLTVHR 154

Query: 450 FV 455
           F+
Sbjct: 155 FL 156


>UniRef50_A7EGP5 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1205

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 369 LVVTYYSDSQVSLCPSYKISIGKTIYD 449
           L   YYS+S+++  P+YK  IG   YD
Sbjct: 814 LTFQYYSESRITFMPTYKFDIGNDTYD 840


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,095,608
Number of Sequences: 1657284
Number of extensions: 10062917
Number of successful extensions: 20478
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20473
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)