Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0727
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.5  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   9.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 467 LLNFNKIVYCFSY*YF 420
           L+ FN IV+ F Y Y+
Sbjct: 543 LIQFNTIVFAFCYCYY 558



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 467 LLNFNKIVYCFSY*YF 420
           L+ FN IV+ F Y Y+
Sbjct: 262 LIQFNTIVFSFCYCYY 277


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -2

Query: 559 MIFFFLFCSEICMXHVYMKLFDSYI 485
           ++F+  +C +    H+Y  +  SY+
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSYL 39


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -2

Query: 559 MIFFFLFCSEICMXHVYMKLFDSYI 485
           ++F+  +C +    H+Y  +  SY+
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSYL 39


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 305 NFEQIWNKIMH 273
           N+ + WNKI+H
Sbjct: 98  NYPKEWNKILH 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,214
Number of Sequences: 336
Number of extensions: 3270
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)