Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0725
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   3.0  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.0  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    23   7.0  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 671 QYWYSLRSAVWCSRY*HTHKMEYLHQESTFD 579
           +YW+SLR +  C  Y   H+ ++  Q+ T++
Sbjct: 189 RYWHSLRLSYAC--YRAKHRQDWAAQKRTYE 217


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 497 ILHGGYPWFFFLAISMCSSLHCSIFL 420
           +L   + W FF+    C+ + CS+ L
Sbjct: 277 LLETTFRWVFFVQFIQCTMIWCSLIL 302


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +2

Query: 149 IYDVTKG---EKHYAKGATYHYFVGKDGSRGLITGDFRVKLKXRTMFLT*NVVICLHYCT 319
           IYD  KG   +K Y +       V +D  +  +    R  L+ RT+       + L+ C 
Sbjct: 83  IYDDVKGFDVDKQYER-VKDRLSVDEDTYKRGVKNCIRNVLRGRTLNNCEKAYLILNQCQ 141

Query: 320 GNKLLNKNIQKL 355
           GN + N   Q+L
Sbjct: 142 GNTITNSLNQQL 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,499
Number of Sequences: 2352
Number of extensions: 14362
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)