Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0725
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         27   0.17 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.6  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 567 LEFLVKCTLLVKILHLVCVSIPRTPY 644
           ++F V   +L+ I+H  C S+P+  Y
Sbjct: 1   MKFFVLFAILIAIVHASCASVPKVVY 26


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 601 RYSILCVCQYREHHTALLKEYQYCGKYFNCL 693
           RY IL   +  EH+     +YQ  GK+FN L
Sbjct: 399 RYEILNF-RKSEHNGTNGYQYQVVGKWFNSL 428


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +1

Query: 565 DWSSSSNVLSW*RYSILCVCQYREHHTALLKEYQYCGKYFNCL 693
           DW   S V  W +   +C+ +        ++  + C K FN L
Sbjct: 498 DWFDYSEVSKWVQKGQICLKEKENEIDFKIEVTEDCNKSFNDL 540


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 364 KGRYYDSQGRETPYLEXFNRKIEQC 438
           +G+ YD+ GR   +   +N   EQC
Sbjct: 538 RGKEYDAAGRTYLFDLDYNESEEQC 562


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 601 RYSILCVCQYREHHTALLKEYQYCGKYFNCL 693
           RY IL   +  EH+     +YQ  GK+FN L
Sbjct: 489 RYEILNF-RKSEHNGTNGYQYQVVGKWFNSL 518


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +1

Query: 316 HWKQTFKQKYTEIGLL 363
           H+++T + +YT +GL+
Sbjct: 134 HYRRTRRDRYTNLGLV 149


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 520 VPSSHSKQYCMVDIPGFFSWLFLCVLH 440
           +PS H +   MV+I     W ++ +++
Sbjct: 261 IPSDHYQVKAMVEIVMKMKWSYVSIIY 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,937
Number of Sequences: 438
Number of extensions: 4192
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)