Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0723
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.2  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 452 SSLTYCICMNVYMY 493
           SS+T  +C N YMY
Sbjct: 56  SSVTLHVCFNSYMY 69


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 348 NKYINLTIYNNNNHIYETENV 286
           N+Y N   Y+NNN   E  +V
Sbjct: 141 NQYENFQQYDNNNFSAEENSV 161


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 348 NKYINLTIYNNNNHIYETENV 286
           N+Y N   Y+NNN   E  +V
Sbjct: 141 NQYENFQQYDNNNFSAEENSV 161


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -1

Query: 205 AYALFKLSSILNTDALLTAYRGVVESCLRYGIIFWGNSTQKDQVFKAQKRCLRSMFGLAI 26
           AYA+       N    L     +V++CL Y    +  +++ +Q+ +  K     + G+ I
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKI 316

Query: 25  ADSC 14
            D C
Sbjct: 317 -DIC 319


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -1

Query: 205 AYALFKLSSILNTDALLTAYRGVVESCLRYGIIFWGNSTQKDQVFKAQKRCLRSMFGLAI 26
           AYA+       N    L     +V++CL Y    +  +++ +Q+ +  K     + G+ I
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKVTKTVLLGVKI 316

Query: 25  ADSC 14
            D C
Sbjct: 317 -DIC 319


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 348 NKYINLTIYNNNNHIYETENV 286
           N+Y N   Y+NNN   E  +V
Sbjct: 141 NQYENFQQYDNNNFSAEENSV 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,848
Number of Sequences: 336
Number of extensions: 3442
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)