Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0723
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    34   0.16 
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    34   0.16 
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    33   0.28 

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = -1

Query: 262 QQIDWKSHTDGLCKRVSSSA---YALFKLSSILNTDALLTAYRGVVESCLRYGIIFWGNS 92
           +++ W+ H +   K +   A   + L    S L+ +     Y  V++    YG   WGN+
Sbjct: 745 RRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNA 804

Query: 91  TQK--DQVFKAQKRCLRSMFG 35
           ++   D + +AQ R LR + G
Sbjct: 805 SRSNIDIIQRAQSRILRIITG 825


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = -1

Query: 262 QQIDWKSHTDGLCKRVSSSA---YALFKLSSILNTDALLTAYRGVVESCLRYGIIFWGNS 92
           +++ W+ H +   K +   A   + L    S L+ +     Y  V++    YG   WGN+
Sbjct: 745 RRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNA 804

Query: 91  TQK--DQVFKAQKRCLRSMFG 35
           ++   D + +AQ R LR + G
Sbjct: 805 SRSNIDIIQRAQSRILRIITG 825


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = -1

Query: 262 QQIDWKSHTDGL---CKRVSSSAYALFKLSSILNTDALLTAYRGVVESCLRYGIIFWGNS 92
           +++ W+ H +      K  +++ + L    S L+ D  +  Y  +++    YG   WGN+
Sbjct: 747 RRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNA 806

Query: 91  TQK--DQVFKAQKRCLRSMFG 35
           +    D + +AQ + LR++ G
Sbjct: 807 SNSNIDIIQRAQSKILRTITG 827


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,987,403
Number of Sequences: 53049
Number of extensions: 531534
Number of successful extensions: 1025
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)