Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0722
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 92 4e-19
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 89 2e-18
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 64 1e-10
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 63 2e-10
03_02_0478 + 8775892-8776377 31 1.1
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 30 1.5
03_02_0483 - 8804021-8804485 30 2.0
01_01_0231 + 1951047-1951499 29 2.6
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 29 2.6
01_01_0229 - 1943473-1943922 29 2.6
09_04_0187 - 15403048-15403237,15403808-15403959,15404052-154042... 29 3.4
03_02_0485 - 8808139-8808618 29 3.4
03_02_0484 + 8805053-8805538 29 3.4
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015... 29 4.5
06_03_0449 + 20907491-20910146,20910313-20910782 29 4.5
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 29 4.5
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 29 4.5
05_04_0085 + 17790417-17790714,17791826-17791869,17793658-177937... 28 6.0
11_01_0469 + 3638493-3641166,3641286-3641653 28 7.9
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 28 7.9
03_02_0009 + 4891545-4892147,4892757-4893308 28 7.9
02_05_0598 + 30250535-30251218 28 7.9
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 28 7.9
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 91.9 bits (218), Expect = 4e-19
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +3
Query: 198 PRLQKGRSSHCWNCFWYQRGAGALVLVSEEAA--KNLKPLARLVGWAYVGVDPSIMGIGP 371
P K ++ N GAGA++L+ + A K L + +A VGVDP+IMG+GP
Sbjct: 277 PAFSKDGTTTAGNASQVSDGAGAVLLMRRDIAMQKGLPIVGVFRSFAAVGVDPAIMGVGP 336
Query: 372 VPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLKSTEAPPRWGHPLGA 551
AI +K L ++DVDL EINEAF +Q + C K L LD +K+ GHPLGA
Sbjct: 337 AVAIPAAVKAAGLQIDDVDLFEINEAFASQYVYCCKKLGLDPAKVNVNGGAMALGHPLGA 396
Query: 552 SGSR 563
+G+R
Sbjct: 397 TGAR 400
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Frame = +1
Query: 1 RHEITRDEVDNYALQSQQKWKTANDAGVFKAEIEPVSLTI------KRKEVKVEVDEHPR 162
R ITR E D A++S +K A +G FK EI PV I + KE+ V D+ R
Sbjct: 205 RFGITRMEQDQAAVESHRKAAAAAASGKFKEEIVPVHTKIVDPKTGEEKEIVVSADDGIR 264
Query: 163 PQTTLEGLKKLPPVFKKEGLVTAGTASGISE 255
P T+L L KL P F K+G TAG AS +S+
Sbjct: 265 PGTSLAVLSKLKPAFSKDGTTTAGNASQVSD 295
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 89.4 bits (212), Expect = 2e-18
Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +3
Query: 180 GPEETAPRLQKGRSSHCWNCFWYQRGAGALVLVSEEAA--KNLKPLARLVGWAYVGVDPS 353
G + P +K ++ N GAGA++L+ + A K L L +A VGVDP+
Sbjct: 269 GLAKLKPVFRKDGTTTAGNSSQVSDGAGAVLLMRRDVAMKKGLPILGVFRSFAAVGVDPA 328
Query: 354 IMGIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLKSTEAPPRW 533
+MG+GP AI +K L + D+DL E+NEAF +Q + C L LD SK+
Sbjct: 329 VMGVGPAVAIPAAVKSAGLQIEDIDLFELNEAFASQFVYCCNKLGLDRSKVNVNGGAIAL 388
Query: 534 GHPLGASGSR 563
GHPLGA+G+R
Sbjct: 389 GHPLGATGAR 398
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = +1
Query: 1 RHEITRDEVDNYALQSQQKWKTANDAGVFKAEIEPVSLTI------KRKEVKVEVDEHPR 162
R+ +TR E D A +S ++ A AG FK EI PV I + K+V + VD+ R
Sbjct: 203 RYGVTRQEQDQAAAESHRRAAAATAAGKFKDEIVPVPTKIVDPKTGEEKKVVISVDDGIR 262
Query: 163 PQTTLEGLKKLPPVFKKEGLVTAGTASGISE 255
P TT GL KL PVF+K+G TAG +S +S+
Sbjct: 263 PGTTASGLAKLKPVFRKDGTTTAGNSSQVSD 293
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 63.7 bits (148), Expect = 1e-10
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 255 GAGALVLVSEEAAKNL--KPLARLVGWAYVGVDPSIMGIGPVPAIENLLKVTKLTLNDVD 428
GA ALVLVS + A+ L + +AR+ G+A P + P AI L L + VD
Sbjct: 261 GAAALVLVSGQKAQELGLQVIARIKGFADAAQAPELFTTSPALAIPKALANAGLESSRVD 320
Query: 429 LIEINEAFVAQTLSCAKALKLDMSKLKSTEAPPRWGHPLGASGSRI 566
EINEAF A L+ K L + K+ GHPLG SG+RI
Sbjct: 321 YYEINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLGCSGARI 366
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 HEITRDEVDNYALQSQQKWKTANDAGVFKAEIEPVSLTIKRKEVKVEVD-EHPRPQTTLE 180
H +TR++ D YA+QS ++ A ++G F EI P+ + + R + V VD + +
Sbjct: 175 HALTREDQDAYAIQSNERGIAARNSGAFAWEIVPIEVPVGRGKPPVLVDKDEGLDKFDPV 234
Query: 181 GLKKLPPVFKKE-GLVTAGTASGISE 255
LKKL P FK+ G VTAG AS IS+
Sbjct: 235 KLKKLRPSFKENGGTVTAGNASSISD 260
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 255 GAGALVLVSEEAAKNL--KPLARLVGWAYVGVDPSIMGIGPVPAIENLLKVTKLTLNDVD 428
GA A+VLVS + AK+L + +AR+ G+A P + P AI + L + +D
Sbjct: 252 GAAAIVLVSGQKAKSLGLQVIARIRGYADAAQAPELFTTTPALAIPKAVSNAGLQTSQID 311
Query: 429 LIEINEAFVAQTLSCAKALKLDMSKLKSTEAPPRWGHPLGASGSRI 566
EINEAF L+ K L + KL + GHP+G SG+RI
Sbjct: 312 YYEINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCSGARI 357
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/82 (30%), Positives = 40/82 (48%)
Frame = +1
Query: 1 RHEITRDEVDNYALQSQQKWKTANDAGVFKAEIEPVSLTIKRKEVKVEVDEHPRPQTTLE 180
+H I+R+E D YA+QS ++ A D+G F EI PV ++ R + + VD+
Sbjct: 180 QHSISREEQDLYAIQSNERAIAARDSGTFSWEIAPVEISSGRGKPPLIVDKDESLAKCTS 239
Query: 181 GLKKLPPVFKKEGLVTAGTASG 246
+LP + +G SG
Sbjct: 240 LPSRLPSKIRSDGAAAIVLVSG 261
>03_02_0478 + 8775892-8776377
Length = 161
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDE 153
WK +A VFKA++ +K++EVKVEVD+
Sbjct: 58 WKETPEAHVFKADVPG----LKKEEVKVEVDD 85
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 402 TKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLKSTEAP 524
TK+T D +L EIN+A + C K K M++ ST AP
Sbjct: 462 TKITQVDRELAEINKAIRNMEVFCGKVGKTIMTREISTAAP 502
>03_02_0483 - 8804021-8804485
Length = 154
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDEHPRPQTTLEGLKK 192
WK +A VFKA++ +K++EVKVEV++ Q + E +K+
Sbjct: 51 WKETPEAHVFKADVPG----LKKEEVKVEVEDGNVLQISGERIKE 91
>01_01_0231 + 1951047-1951499
Length = 150
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDE 153
WK ++ VFKA++ V K++EVKVEV+E
Sbjct: 47 WKETPESHVFKADLPGV----KKEEVKVEVEE 74
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDE 153
WK ++ VFKA++ V K++EVKVEV+E
Sbjct: 47 WKETPESHVFKADLPGV----KKEEVKVEVEE 74
>01_01_0229 - 1943473-1943922
Length = 149
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDE 153
WK ++ VFKA++ V K++EVKVEV+E
Sbjct: 46 WKETPESHVFKADLPGV----KKEEVKVEVEE 73
>09_04_0187 -
15403048-15403237,15403808-15403959,15404052-15404210,
15404422-15404562
Length = 213
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 190 KLPPVFKKEGLVTAGT-ASGISEVLERWCWSARKP 291
K+ +F+ G + AG SG++ L+ WC S R P
Sbjct: 87 KIHSLFELSGYIFAGAFGSGVNFYLQSWCTSVRGP 121
>03_02_0485 - 8808139-8808618
Length = 159
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDE 153
WK + VFKA++ +K++EVKVEVD+
Sbjct: 56 WKETPEVHVFKADVPG----LKKEEVKVEVDD 83
>03_02_0484 + 8805053-8805538
Length = 161
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 58 WKTANDAGVFKAEIEPVSLTIKRKEVKVEVDE 153
WK +A VFKA++ +K++EVKVEV++
Sbjct: 58 WKETPEAHVFKADVP----GLKKEEVKVEVED 85
>10_08_0521 +
18500105-18500529,18501216-18501284,18501467-18501555,
18501726-18501838,18502023-18502124,18502576-18502663,
18502795-18503361,18503766-18504149,18504168-18504384,
18504466-18504548,18505174-18505256,18505796-18506032,
18506481-18506658,18506814-18507328,18507740-18507916,
18508385-18508768,18508885-18509031
Length = 1285
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 537 VPSAVAPPLTSACSCRASAPWHTTASE 457
V SA+APP S+ C ++ WH T +
Sbjct: 626 VGSAIAPPAFSSSGCCLASVWHDTLKD 652
>06_03_0449 + 20907491-20910146,20910313-20910782
Length = 1041
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +3
Query: 360 GIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLKSTEAPPRW 533
G P P K+TKLT + + I S + LDMS K T A P W
Sbjct: 213 GFAPAPVPPAFAKLTKLTYLWMSKMNITGEIPEAFSSLTELTLLDMSGNKLTGAIPAW 270
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -1
Query: 476 GTRQRLSHEGLVDLNKVDIIEGEFG 402
GT Q++ H G + +V++++G+FG
Sbjct: 224 GTNQKMHHSGFTAMFQVELLKGKFG 248
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 273 LVSEEAAKNLKPLARLVGWAYVGVDPSIMGIGPVPAIENLLKVTKLTLNDVDLIEINEAF 452
+V E +K +P+ARLVG G S +PA LL+ + +DL+ ++
Sbjct: 232 MVKESVSKG-QPMARLVGRLVKG---SSKPHPSLPARGGLLRTAPVHEVHLDLVRVSSGK 287
Query: 453 VAQTLSCAKALKLDMSKLKSTEAPPRWGHP 542
+ + + ++ +S S+ WG P
Sbjct: 288 IYRLRNPSRKYLASLSSYDSSNPTKDWGFP 317
>05_04_0085 +
17790417-17790714,17791826-17791869,17793658-17793793,
17794315-17794391,17794646-17794706,17794707-17794924,
17795168-17795412,17796032-17796401,17796916-17797344
Length = 625
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 537 VPSAVAPPLTSACSCRASAPWHTTASEPRR 448
VP+ A L A C A+A W T PRR
Sbjct: 10 VPAGAAAALAVALVCLAAAAWWTVERAPRR 39
>11_01_0469 + 3638493-3641166,3641286-3641653
Length = 1013
Score = 27.9 bits (59), Expect = 7.9
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +3
Query: 219 SSHCWNCFWYQRGAGALVLVSEEAAKNLKPLARLVGWAYVGVDPSIMGIGPVPAIENLLK 398
SSH C + G L L+ + A +L P L+ W S G+ +++N +
Sbjct: 17 SSHAVICSTFGNGTDQLSLLEFKKAISLDPQQSLISWNDSTNYCSWEGVS--CSLKNPGR 74
Query: 399 VTKLTLNDVDLI-EINEAFVAQTLSCAKALKLDMSKLKSTEAPPRWGH 539
VT L L + L+ I+ + L+ K L L + S E PP GH
Sbjct: 75 VTSLNLTNRALVGHISPSL--GNLTFLKYLAL-LKNALSGEIPPSLGH 119
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -1
Query: 506 QLAHVELQRLGTRQRLSHEGLVDLNKVDIIEGEFGDFKKVL 384
Q+ VEL RL ++L +D NK+ ++ E GD KK++
Sbjct: 262 QMLPVELTRLALLEKLH----LDNNKLSVLPPEVGDLKKLI 298
>03_02_0009 + 4891545-4892147,4892757-4893308
Length = 384
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 207 QKGRSSHCWNCFWYQRGAGALVLVSEEAAKNLKPLARLVGW--AYVGVDPSIMGI 365
+K + WN + + G A+VL + K L L GW +Y+ + ++ G+
Sbjct: 296 KKNKYRFYWNIYHHSVGYSAIVLAAVNIFKGLDILKPASGWKRSYIAILATLAGV 350
>02_05_0598 + 30250535-30251218
Length = 227
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 443 RGLRGSDAVVCQGAEARHEQAEVNGGATALGTPARRFRLP 562
R LR + V ++ARH + G TALG A R RLP
Sbjct: 14 RPLRRAAPVPALRSQARHPLLLGHAGETALGVWATRARLP 53
>01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969,
41140165-41140211,41140796-41141029,41141305-41141505,
41141506-41143407,41144140-41145303,41145574-41145879
Length = 1737
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 596 PSELVHEVHRDPGAGSAERVSPARWRLR*LQLAHVE-LQRLGTRQRLSHEGLVDL 435
P + H+VH A + V R R R L++ H+E ++RL ++ + +V+L
Sbjct: 926 PGTVEHDVHEIENADFSSIVELGRLRCRELEVRHLENVERLEDARKANLRDMVEL 980
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,441,476
Number of Sequences: 37544
Number of extensions: 400117
Number of successful extensions: 1463
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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