Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0722
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.7  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   6.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   6.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.2  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 385 SMAGTGPMPMMLGSTPT 335
           +M+G  P+P M GS PT
Sbjct: 425 NMSGMPPLPNMPGSMPT 441


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 337 WEWTPASWALGLC 375
           W+  P  W LG+C
Sbjct: 95  WQQYPWQWGLGIC 107


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 216 FLFEDGGQFLQA 181
           FLF++G +FLQA
Sbjct: 169 FLFKEGDRFLQA 180


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 216 FLFEDGGQFLQA 181
           FLF++G +FLQA
Sbjct: 185 FLFKEGDRFLQA 196


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 275 GQRGSRQEPKAPXSPRRLGLCGSGPQHHGHW 367
           GQ  S  + +    P   G+  SG QH G W
Sbjct: 905 GQTWSNSQVQGVAVPGS-GIVASGQQHAGGW 934


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,396
Number of Sequences: 438
Number of extensions: 3122
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)