Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0721
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RN68 Cluster: Putative uncharacterized protein PY0195...    36   1.2  
UniRef50_A7QUQ9 Cluster: Chromosome chr1 scaffold_180, whole gen...    34   3.7  
UniRef50_A5AMS4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_UPI0000F2C20A Cluster: PREDICTED: similar to G protein-...    33   4.9  
UniRef50_Q30QX5 Cluster: Diguanylate cyclase; n=1; Thiomicrospir...    33   8.6  
UniRef50_A4XK36 Cluster: Glycosyl transferase, family 2; n=1; Ca...    33   8.6  
UniRef50_Q59DV5 Cluster: CG31156-PB, isoform B; n=3; Sophophora|...    33   8.6  

>UniRef50_Q7RN68 Cluster: Putative uncharacterized protein PY01954;
            n=1; Plasmodium yoelii yoelii|Rep: Putative
            uncharacterized protein PY01954 - Plasmodium yoelii
            yoelii
          Length = 1628

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
 Frame = +1

Query: 256  KFNNYFSIKKHLETFKSNKLMLN*SFELFI------NTVKFVPNHYLEIDKRYLFT*IFG 417
            K  NY+ I + L+T K N+   N + E F       N + F    Y +   R +    F 
Sbjct: 1485 KMKNYYIIDETLKTIKFNRKQTNYNLEKFFNNHYISNNINFTDKTYFQNFMRKVNYDAFL 1544

Query: 418  NSGFFFPQNKQIFHMCIGNNC-KQIKSLS*ISVNDSRASIINSIYIKLYCS 567
            N+  +  +NK++F  C    C KQ+KS S +  +     I    Y  +YC+
Sbjct: 1545 NTSKYSYKNKELFGNC--PYCKKQLKSFSNL-CDSCHNPIYLCYYFFVYCT 1592


>UniRef50_A7QUQ9 Cluster: Chromosome chr1 scaffold_180, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr1 scaffold_180, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 828

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 681 ILPKVLA*YTSKIKDCG-QPCLAHNHCDIWFDSCLAHLLRAIKFYINTVNNRRSTVIYR 508
           +L +  A +TS I+D G +PC+ H  C +W      HL +A+K  I+ +  + S +++R
Sbjct: 572 LLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL-IDEIPFQPSVMVWR 629


>UniRef50_A5AMS4 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 787

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 681 ILPKVLA*YTSKIKDCG-QPCLAHNHCDIWFDSCLAHLLRAIKFYINTVNNRRSTVIYR 508
           +L +  A +TS I+D G +PC+ H  C +W      HL +A+K  I+ +  + S +++R
Sbjct: 531 LLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKL-IDEIPFQPSVMVWR 588


>UniRef50_UPI0000F2C20A Cluster: PREDICTED: similar to G
           protein-coupled receptor 111; n=2; Theria|Rep:
           PREDICTED: similar to G protein-coupled receptor 111 -
           Monodelphis domestica
          Length = 738

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
 Frame = -3

Query: 651 SKIKDCGQPCLAHNHCDIWFDSCLAHLLRAIKFYINTVNNRRST---------VIYRNSG 499
           S   DC  PC+ +++C   F SC A L   I+F       ++ST          I+ N  
Sbjct: 65  SDTPDCENPCIENSYC---FQSCAAGLEGNIRFLCRNKEWQKSTDTCTSLNVLTIFENKE 121

Query: 498 QTFNLLTIIT 469
           +TFN+L   T
Sbjct: 122 KTFNILAATT 131


>UniRef50_Q30QX5 Cluster: Diguanylate cyclase; n=1; Thiomicrospira
           denitrificans ATCC 33889|Rep: Diguanylate cyclase -
           Thiomicrospira denitrificans (strain ATCC 33889 / DSM
           1351)
          Length = 564

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -1

Query: 239 MAIYVSILLTFEPQYNVFIEEFKVSKNIVF*SMVSFIYHQVDFRSTV 99
           +A+++  +   + QY   I E K+  +I+F S+ +FIY  +DF S +
Sbjct: 251 LALFIQTIFKTKEQY---INEHKLLNSIIFVSLANFIYGLIDFNSAL 294


>UniRef50_A4XK36 Cluster: Glycosyl transferase, family 2; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Glycosyl transferase, family 2 - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 632

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +1

Query: 232 IAIEY*LVKFNNYFSIKKHLETFKSNKLMLN*SFELFINTVKF 360
           + ++Y L+  NN+   K H+E FK NKL L  S  L I    F
Sbjct: 338 MVVQY-LLDINNFLEAKVHIEQFKDNKLKLQYSTLLHIKEKNF 379


>UniRef50_Q59DV5 Cluster: CG31156-PB, isoform B; n=3;
           Sophophora|Rep: CG31156-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 993

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 256 KFNNYFSIKKHLETFKSNKLM-LN*SFELFINTVKFVPNHYLEIDKRYLFT*IFGNSGFF 432
           KF NYF+ +  ++T K  +++ +N   +    +VK   N YL+ D     T  + N G  
Sbjct: 407 KFENYFNFQGDVKTIKPYQMLAINRGEKHKWLSVKIETNDYLKRDLMRYITDQYMNQGLQ 466

Query: 433 FPQNKQIF 456
           +P  +++F
Sbjct: 467 YPLRREVF 474


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,882,399
Number of Sequences: 1657284
Number of extensions: 13162032
Number of successful extensions: 28328
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28323
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)