Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0721
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 317 ISLLLLNVSRCFLIEK*LLNLTNQY 243
           + L + N + C+L  + +L L N+Y
Sbjct: 808 VFLTIFNAAHCYLATELVLMLKNRY 832


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 639 DCGQPCLAHNHCDI 598
           DCGQ C+  +  DI
Sbjct: 561 DCGQNCMCTHQVDI 574


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = -3

Query: 642 KDCGQPCLAHNHCDIWFDSCLAHLLRAIKFYINTVNNR 529
           K     C   N CD+W +      L++ +  +N++  R
Sbjct: 41  KQNSSSCGNGNRCDLWSEKFPIQELKSQESLLNSIQIR 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,446
Number of Sequences: 336
Number of extensions: 3889
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)