Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0721
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p pro...    33   0.48 
AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-P...    33   0.48 
AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-P...    33   0.48 
AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p pro...    29   7.9  
AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-P...    29   7.9  

>AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p
           protein.
          Length = 948

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 256 KFNNYFSIKKHLETFKSNKLM-LN*SFELFINTVKFVPNHYLEIDKRYLFT*IFGNSGFF 432
           KF NYF+ +  ++T K  +++ +N   +    +VK   N YL+ D     T  + N G  
Sbjct: 407 KFENYFNFQGDVKTIKPYQMLAINRGEKHKWLSVKIETNDYLKRDLMRYITDQYMNQGLQ 466

Query: 433 FPQNKQIF 456
           +P  +++F
Sbjct: 467 YPLRREVF 474


>AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-PB,
           isoform B protein.
          Length = 993

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 256 KFNNYFSIKKHLETFKSNKLM-LN*SFELFINTVKFVPNHYLEIDKRYLFT*IFGNSGFF 432
           KF NYF+ +  ++T K  +++ +N   +    +VK   N YL+ D     T  + N G  
Sbjct: 407 KFENYFNFQGDVKTIKPYQMLAINRGEKHKWLSVKIETNDYLKRDLMRYITDQYMNQGLQ 466

Query: 433 FPQNKQIF 456
           +P  +++F
Sbjct: 467 YPLRREVF 474


>AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-PA,
           isoform A protein.
          Length = 948

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 256 KFNNYFSIKKHLETFKSNKLM-LN*SFELFINTVKFVPNHYLEIDKRYLFT*IFGNSGFF 432
           KF NYF+ +  ++T K  +++ +N   +    +VK   N YL+ D     T  + N G  
Sbjct: 407 KFENYFNFQGDVKTIKPYQMLAINRGEKHKWLSVKIETNDYLKRDLMRYITDQYMNQGLQ 466

Query: 433 FPQNKQIF 456
           +P  +++F
Sbjct: 467 YPLRREVF 474


>AY075278-1|AAL68145.1|  204|Drosophila melanogaster AT30094p
           protein.
          Length = 204

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 92  TLGPST*SRPDGR*KRPYFKILYFSKL 172
           T+GP   S P G   R +F +L+F+KL
Sbjct: 105 TIGPDKFSFPSGHASRAFFVLLFFAKL 131


>AE014134-1795|AAN10729.1|  204|Drosophila melanogaster CG31717-PA
           protein.
          Length = 204

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 92  TLGPST*SRPDGR*KRPYFKILYFSKL 172
           T+GP   S P G   R +F +L+F+KL
Sbjct: 105 TIGPDKFSFPSGHASRAFFVLLFFAKL 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,832,588
Number of Sequences: 53049
Number of extensions: 565708
Number of successful extensions: 908
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)