Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0720
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein. 34 0.58
AK022688-1|BAB14180.1| 651|Homo sapiens protein ( Homo sapiens ... 34 0.58
AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein. 34 0.58
X91906-1|CAA63000.1| 746|Homo sapiens voltage-gated chloride io... 31 4.1
BC130431-1|AAI30432.1| 746|Homo sapiens CLCN5 protein protein. 31 4.1
BC130429-1|AAI30430.1| 746|Homo sapiens CLCN5 protein protein. 31 4.1
AL663118-1|CAI41555.1| 746|Homo sapiens chloride channel 5 (nep... 31 4.1
L12350-1|AAA03703.1| 1172|Homo sapiens thrombospondin 2 protein. 31 5.4
BX322234-1|CAI23645.1| 1172|Homo sapiens thrombospondin 2 protein. 31 5.4
BC150175-1|AAI50176.1| 1172|Homo sapiens thrombospondin 2 protein. 31 5.4
BC146676-1|AAI46677.1| 1172|Homo sapiens thrombospondin 2 protein. 31 5.4
>BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.
Length = 1131
Score = 33.9 bits (74), Expect = 0.58
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 547 PXTTTSADGYWLK--HAVSPLLHMLYQS--FSCIYCCWTCTGTRILGTAPVDSTR 699
P TT A LK H + P +H + +S F CI+CC TG L V R
Sbjct: 883 PFVTTEAYELHLKERHHIMPTVHTVLKSPAFKCIHCCGVYTGNMTLAAIAVHLVR 937
>AK022688-1|BAB14180.1| 651|Homo sapiens protein ( Homo sapiens
cDNA FLJ12626 fis, clone NT2RM4001810, weakly similar to
AGGRECAN CORE PROTEIN PRECURSOR. ).
Length = 651
Score = 33.9 bits (74), Expect = 0.58
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 547 PXTTTSADGYWLK--HAVSPLLHMLYQS--FSCIYCCWTCTGTRILGTAPVDSTR 699
P TT A LK H + P +H + +S F CI+CC TG L V R
Sbjct: 403 PFVTTEAYELHLKERHHIMPTVHTVLKSPAFKCIHCCGVYTGNMTLAAIAVHLVR 457
>AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.
Length = 1181
Score = 33.9 bits (74), Expect = 0.58
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 547 PXTTTSADGYWLK--HAVSPLLHMLYQS--FSCIYCCWTCTGTRILGTAPVDSTR 699
P TT A LK H + P +H + +S F CI+CC TG L V R
Sbjct: 933 PFVTTEAYELHLKERHHIMPTVHTVLKSPAFKCIHCCGVYTGNMTLAAIAVHLVR 987
>X91906-1|CAA63000.1| 746|Homo sapiens voltage-gated chloride ion
channel protein.
Length = 746
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 179 TXLKTWCSRGWNCLSPPLKCXLGVAA 102
T +WCS+G +C++P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>BC130431-1|AAI30432.1| 746|Homo sapiens CLCN5 protein protein.
Length = 746
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 179 TXLKTWCSRGWNCLSPPLKCXLGVAA 102
T +WCS+G +C++P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>BC130429-1|AAI30430.1| 746|Homo sapiens CLCN5 protein protein.
Length = 746
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 179 TXLKTWCSRGWNCLSPPLKCXLGVAA 102
T +WCS+G +C++P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>AL663118-1|CAI41555.1| 746|Homo sapiens chloride channel 5
(nephrolithiasis 2, X-linked, Dent disease) protein.
Length = 746
Score = 31.1 bits (67), Expect = 4.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 179 TXLKTWCSRGWNCLSPPLKCXLGVAA 102
T +WCS+G +C++P L +G AA
Sbjct: 484 TVFNSWCSQGADCITPGLYAMVGAAA 509
>L12350-1|AAA03703.1| 1172|Homo sapiens thrombospondin 2 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 684 GGCTEYTRACTGPTAVNAGKALIEHVQER 598
GG E TR C P GKA + VQER
Sbjct: 512 GGIRERTRVCNSPEPQYGGKACVGDVQER 540
>BX322234-1|CAI23645.1| 1172|Homo sapiens thrombospondin 2 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 684 GGCTEYTRACTGPTAVNAGKALIEHVQER 598
GG E TR C P GKA + VQER
Sbjct: 512 GGIRERTRVCNSPEPQYGGKACVGDVQER 540
>BC150175-1|AAI50176.1| 1172|Homo sapiens thrombospondin 2 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 684 GGCTEYTRACTGPTAVNAGKALIEHVQER 598
GG E TR C P GKA + VQER
Sbjct: 512 GGIRERTRVCNSPEPQYGGKACVGDVQER 540
>BC146676-1|AAI46677.1| 1172|Homo sapiens thrombospondin 2 protein.
Length = 1172
Score = 30.7 bits (66), Expect = 5.4
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 684 GGCTEYTRACTGPTAVNAGKALIEHVQER 598
GG E TR C P GKA + VQER
Sbjct: 512 GGIRERTRVCNSPEPQYGGKACVGDVQER 540
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,605,008
Number of Sequences: 237096
Number of extensions: 2759414
Number of successful extensions: 5708
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5705
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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