Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0719
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.3  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +3

Query: 570 FPCRPYSLXCGICLPCF-CSPRNAGESKRC 656
           F   PY++  G+CL  F   P N   S++C
Sbjct: 191 FTYMPYNIVFGLCLTTFGLLPVNGVTSEKC 220


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 518 GLLFMSGYIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSA 396
           G     G I E + KN+  G+P  F   V P     G++++
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITS 346


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 518 GLLFMSGYIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSA 396
           G     G I E + KN+  G+P  F   V P     G++++
Sbjct: 306 GYTTREGMIVEMMRKNETPGMPNDFEEFVHPTVAKRGSITS 346


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 518 GLLFMSGYIFECI*KNKQIGVPRTFPRKVPPDAPCSGALSA 396
           G     G I E + KN+  G+P  F   V P     G++++
Sbjct: 304 GYTTREGMIVEMMRKNETPGMPNDFEGFVHPTVAKRGSITS 344


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 138 TWTPTSKGEKPSIRAMAHYVNHHPN 212
           TW     G + ++  M  +VN  P+
Sbjct: 271 TWNVVFNGSRKNLDVMKSFVNFRPS 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,710
Number of Sequences: 336
Number of extensions: 2924
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)