Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0717
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    22   5.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.7  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 65  IYVVDVCGLQLQFNTRW 115
           I  V VC  QL F+T W
Sbjct: 11  IAFVGVCTAQLNFSTDW 27


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 516 YYSTYRVFSLIQFSLTQV*LYTLYIHT 436
           +YST R  +L+   +  V L  L +HT
Sbjct: 49  FYSTLRPINLLVQIILDVILLILNVHT 75


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 506 LIEFSHLSSSRLPRFDCIRY 447
           L EFS+  S  LP+F    +
Sbjct: 306 LYEFSNFVSQHLPKFSAANF 325


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 516 YYSTYRVFSLIQFSLTQV*LYTLYIHT 436
           +YST R  +L+   +  V L  L +HT
Sbjct: 49  FYSTLRPINLLVQIILDVILLILNVHT 75


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 516 YYSTYRVFSLIQFSLTQV*LYTLYIHT 436
           +YST R  +L+   +  V L  L +HT
Sbjct: 369 FYSTLRPINLLVQIILDVILLILNVHT 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,802
Number of Sequences: 336
Number of extensions: 3628
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)