Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0717
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456369-1|CAG30255.1| 488|Homo sapiens ALG12 protein. 81 4e-15
BC098562-1|AAH98562.1| 488|Homo sapiens asparagine-linked glyco... 81 4e-15
BC001729-1|AAH01729.1| 488|Homo sapiens asparagine-linked glyco... 81 4e-15
AL671710-1|CAO72064.1| 488|Homo sapiens asparagine-linked glyco... 81 4e-15
AJ303120-1|CAC67488.1| 488|Homo sapiens putative alpha mannosyl... 81 4e-15
AJ290427-1|CAC83681.1| 488|Homo sapiens putative dolichyl-p-man... 81 4e-15
AF311904-1|AAM94900.1| 683|Homo sapiens membrane protein SB87 p... 81 4e-15
U24105-1|AAB70879.1| 1224|Homo sapiens coatomer protein protein. 30 9.1
BC038447-1|AAH38447.1| 1233|Homo sapiens COPA protein protein. 30 9.1
AL513282-3|CAI12455.1| 1233|Homo sapiens coatomer protein comple... 30 9.1
AL513282-2|CAI12454.1| 1224|Homo sapiens coatomer protein comple... 30 9.1
AL445230-2|CAI15004.1| 1233|Homo sapiens coatomer protein comple... 30 9.1
AL445230-1|CAI15005.1| 1224|Homo sapiens coatomer protein comple... 30 9.1
>CR456369-1|CAG30255.1| 488|Homo sapiens ALG12 protein.
Length = 488
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSA 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>BC098562-1|AAH98562.1| 488|Homo sapiens asparagine-linked
glycosylation 12 homolog (S. cerevisiae,
alpha-1,6-mannosyltr protein.
Length = 488
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSA 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>BC001729-1|AAH01729.1| 488|Homo sapiens asparagine-linked
glycosylation 12 homolog (S. cerevisiae,
alpha-1,6-mannosyltr protein.
Length = 488
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSA 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>AL671710-1|CAO72064.1| 488|Homo sapiens asparagine-linked
glycosylation 12 homolog (S. cerevisiae,
alpha-1,6-mannosyltr protein.
Length = 488
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSA 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>AJ303120-1|CAC67488.1| 488|Homo sapiens putative alpha
mannosyltransferase protein.
Length = 488
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSA 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>AJ290427-1|CAC83681.1| 488|Homo sapiens putative dolichyl-p-man:
Man7GlcNAc2-PP-dolichyl mannosyltransferase protein.
Length = 488
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYSA 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>AF311904-1|AAM94900.1| 683|Homo sapiens membrane protein SB87
precursor protein.
Length = 683
Score = 81.0 bits (191), Expect = 4e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -3
Query: 413 RLFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*L 234
R + VPAGI + +TV +DS FW +L WPE +VLWYNT+LNKSSNWG S LL +
Sbjct: 208 RALRHAVPAGILCLGLTVAVDSYFWRQLTWPEGKVLWYNTVLNKSSNWGTSPLLWYFYST 267
Query: 233 LP 228
LP
Sbjct: 268 LP 269
>U24105-1|AAB70879.1| 1224|Homo sapiens coatomer protein protein.
Length = 1224
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 ISGVIARTRHFKLPKPLLERNRNLCKRESFYPH 600
I G+ T KLPK LE+ + +C+ +++ H
Sbjct: 1061 IVGLSVETERKKLPKETLEQQKRICEMAAYFTH 1093
>BC038447-1|AAH38447.1| 1233|Homo sapiens COPA protein protein.
Length = 1233
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 ISGVIARTRHFKLPKPLLERNRNLCKRESFYPH 600
I G+ T KLPK LE+ + +C+ +++ H
Sbjct: 1070 IVGLSVETERKKLPKETLEQQKRICEMAAYFTH 1102
>AL513282-3|CAI12455.1| 1233|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1233
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 ISGVIARTRHFKLPKPLLERNRNLCKRESFYPH 600
I G+ T KLPK LE+ + +C+ +++ H
Sbjct: 1070 IVGLSVETERKKLPKETLEQQKRICEMAAYFTH 1102
>AL513282-2|CAI12454.1| 1224|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1224
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 ISGVIARTRHFKLPKPLLERNRNLCKRESFYPH 600
I G+ T KLPK LE+ + +C+ +++ H
Sbjct: 1061 IVGLSVETERKKLPKETLEQQKRICEMAAYFTH 1093
>AL445230-2|CAI15004.1| 1233|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1233
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 ISGVIARTRHFKLPKPLLERNRNLCKRESFYPH 600
I G+ T KLPK LE+ + +C+ +++ H
Sbjct: 1070 IVGLSVETERKKLPKETLEQQKRICEMAAYFTH 1102
>AL445230-1|CAI15005.1| 1224|Homo sapiens coatomer protein complex,
subunit alpha protein.
Length = 1224
Score = 29.9 bits (64), Expect = 9.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 502 ISGVIARTRHFKLPKPLLERNRNLCKRESFYPH 600
I G+ T KLPK LE+ + +C+ +++ H
Sbjct: 1061 IVGLSVETERKKLPKETLEQQKRICEMAAYFTH 1093
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,669,453
Number of Sequences: 237096
Number of extensions: 2130267
Number of successful extensions: 3484
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3484
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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