Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0717
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071132-1|AAL48754.1|  678|Drosophila melanogaster RE17513p pro...    90   2e-18
AE014297-1027|AAF54441.1|  678|Drosophila melanogaster CG8412-PA...    90   2e-18
AY069643-1|AAL39788.1|  623|Drosophila melanogaster LD40966p pro...    29   8.0  
AE014297-3740|AAF56419.1|  623|Drosophila melanogaster CG11851-P...    29   8.0  

>AY071132-1|AAL48754.1|  678|Drosophila melanogaster RE17513p
           protein.
          Length = 678

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 37/61 (60%), Positives = 46/61 (75%)
 Frame = -3

Query: 410 LFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*LL 231
           L K+ +PAG+ ++A TV++DS FW RLLWPE EVLWYNT+LNKSSNWG S  L +    L
Sbjct: 197 LLKVALPAGVCILAATVLVDSFFWRRLLWPEGEVLWYNTVLNKSSNWGTSPFLWYFYSAL 256

Query: 230 P 228
           P
Sbjct: 257 P 257


>AE014297-1027|AAF54441.1|  678|Drosophila melanogaster CG8412-PA
           protein.
          Length = 678

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 37/61 (60%), Positives = 46/61 (75%)
 Frame = -3

Query: 410 LFKIVVPAGIGLIAITVIIDSIFWGRLLWPEAEVLWYNTILNKSSNWGVSFLLMFIV*LL 231
           L K+ +PAG+ ++A TV++DS FW RLLWPE EVLWYNT+LNKSSNWG S  L +    L
Sbjct: 197 LLKVALPAGVCILAATVLVDSFFWRRLLWPEGEVLWYNTVLNKSSNWGTSPFLWYFYSAL 256

Query: 230 P 228
           P
Sbjct: 257 P 257


>AY069643-1|AAL39788.1|  623|Drosophila melanogaster LD40966p
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 374 IAITVI-IDSIFWGRLLWPEAEVLWYNTILNKSSN-WGVSFLLMFIV 240
           +AI +I ID+ ++G+L +    ++WYN   +   N +G   L  +I+
Sbjct: 277 VAIPMIAIDTSYFGKLTFAPLNIVWYNVFTSHGPNIFGTEPLSYYII 323


>AE014297-3740|AAF56419.1|  623|Drosophila melanogaster CG11851-PA
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 374 IAITVI-IDSIFWGRLLWPEAEVLWYNTILNKSSN-WGVSFLLMFIV 240
           +AI +I ID+ ++G+L +    ++WYN   +   N +G   L  +I+
Sbjct: 277 VAIPMIAIDTSYFGKLTFAPLNIVWYNVFTSHGPNIFGTEPLSYYII 323


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,952,605
Number of Sequences: 53049
Number of extensions: 622553
Number of successful extensions: 1606
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)