Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0715
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DK17 Cluster: Chromosome undetermined scaffold_53, wh...    35   2.2  
UniRef50_Q8I5E6 Cluster: Putative uncharacterized protein; n=6; ...    33   5.1  
UniRef50_A6S948 Cluster: Predicted protein; n=1; Botryotinia fuc...    33   6.7  
UniRef50_A6LL65 Cluster: NADH/Ubiquinone/plastoquinone; n=1; The...    33   8.9  
UniRef50_Q59YW4 Cluster: Putative uncharacterized protein; n=2; ...    33   8.9  

>UniRef50_A0DK17 Cluster: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_53,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 320

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -1

Query: 447 E*PHQALNVLFIYKKTPNCIILVELK 370
           E PHQ+ NVLF Y+K  N +IL+ LK
Sbjct: 207 EYPHQSNNVLFAYRKASNSLILLNLK 232


>UniRef50_Q8I5E6 Cluster: Putative uncharacterized protein; n=6;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1979

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +2

Query: 272  YEVECIKTHLEKSNFIL*AFAFRQL*INLKSIPFNSTNMIQFGVFL*MNNTLSA*CGHSV 451
            Y +  +  H+ K N+    F + +  + ++  P NS N+IQ GVF      +     HS+
Sbjct: 1573 YNIIILSLHVPKFNYENDLFNYSENVVFIRGSPLNSYNLIQAGVFY-AKRIIILNSNHSL 1631

Query: 452  FVHILIYSGFDEIILM 499
            F+    Y   +E+I++
Sbjct: 1632 FIDKDAYRIDNEVIII 1647


>UniRef50_A6S948 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 328

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -1

Query: 438 HQALNVLFIYKKTPNCIILVELK--GILFKLIYSCRNAKAYKMKFDFSKWVFIHS 280
           H AL  LF  +  PNCI++V     G++ K++Y    A      F F  WV + S
Sbjct: 124 HAALWTLFWVQFIPNCIVVVTFAFVGVILKIVYIGVLADRGDYTFPFFVWVQVES 178


>UniRef50_A6LL65 Cluster: NADH/Ubiquinone/plastoquinone; n=1;
           Thermosipho melanesiensis BI429|Rep:
           NADH/Ubiquinone/plastoquinone - Thermosipho
           melanesiensis BI429
          Length = 401

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 26/94 (27%), Positives = 43/94 (45%)
 Frame = -1

Query: 531 TRVSCSFCLNIINMISSNPL*INICTNTE*PHQALNVLFIYKKTPNCIILVELKGILFKL 352
           T + CS  ++     S N    NI       H ALN+LFI     N  +L+E   +L  L
Sbjct: 38  TNIICSLLVSYFLFKSKND---NIYLFFSLLHSALNLLFISNDLFNIYVLLETSTLLISL 94

Query: 351 IYSCRNAKAYKMKFDFSKWVFIHSTSYNQFLMNL 250
           +    N K ++ K    K++F  S + + +L+ +
Sbjct: 95  LI-LSNEK-FEYKLTVIKYIFASSLAMSLYLIGV 126


>UniRef50_Q59YW4 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 888

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -3

Query: 502 YHQYDFIKSTVDQYMYKYRMTASGA*CVIHLQKNTKL 392
           YH++ F +  ++QY+Y Y+  A G+  +I L K+ ++
Sbjct: 527 YHEHKFTRVLINQYLYLYKSKAMGSNRLIELTKSKQI 563


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,917,540
Number of Sequences: 1657284
Number of extensions: 11694154
Number of successful extensions: 20106
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20098
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)