Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0714
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006744-1|AAF60506.2|  328|Caenorhabditis elegans Serpentine re...    33   0.14 
AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z66561-7|CAB54206.2|  419|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF304127-1|AAG50240.1|  419|Caenorhabditis elegans innexin protein.    28   5.3  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   5.3  
AF067944-1|AAC17672.1|  237|Caenorhabditis elegans Hypothetical ...    28   7.0  
Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory recep...    27   9.2  

>AC006744-1|AAF60506.2|  328|Caenorhabditis elegans Serpentine
           receptor, class t protein52 protein.
          Length = 328

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = -1

Query: 673 NPVQTLHNILLKFGRIYAHVVKVFFLNIILKYGIKA*VGKYIFVFSMIICNFGKRLNLNL 494
           NP+Q L+N++   G I  +    FF+      G K   GK +F+ S +IC+      L  
Sbjct: 198 NPIQNLNNVVFISGTIVLYGAYCFFM-AKKTMGYKVSAGKNVFIQSTLICSINCSSALVY 256

Query: 493 TCLKLH 476
           + +  H
Sbjct: 257 SSMMFH 262


>AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical
           protein T10H9.1 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 244 ITYIHCICFITSMPGFIMVIVLRICFFFVRIIFYNFLIRNLFGLLHFTRIIFV 86
           +T IHC+   +S P F +  +L   FF V +    FL      +L  TR++ V
Sbjct: 163 MTRIHCVTTSSSGPAFHLYFLLSTIFFGVLLSLAYFLFICKLFVLRETRVVNV 215


>Z66561-7|CAB54206.2|  419|Caenorhabditis elegans Hypothetical
           protein F08G12.10 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 446 INFYFWTPQIMQFQACQVQIKSFPKITYYHTKNKNILSNLRFY 574
           IN+Y W P ++ FQA    +       ++     N+  +LRF+
Sbjct: 101 INYYRWVPLVLLFQAAMFVLPYHLWNLFHKRTTINLKGSLRFF 143


>AF304127-1|AAG50240.1|  419|Caenorhabditis elegans innexin protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 446 INFYFWTPQIMQFQACQVQIKSFPKITYYHTKNKNILSNLRFY 574
           IN+Y W P ++ FQA    +       ++     N+  +LRF+
Sbjct: 101 INYYRWVPLVLLFQAAMFVLPYHLWNLFHKRTTINLKGSLRFF 143


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 286 TSHPKLIRINFFKTITYIHCICFITSMPGFIMVI 185
           T  PK   I   K I Y+HCICF     G + +I
Sbjct: 40  TKSPKSFGI--LKWIIYVHCICFTCEWLGNVFLI 71


>AF067944-1|AAC17672.1|  237|Caenorhabditis elegans Hypothetical
           protein K10C9.4 protein.
          Length = 237

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 468 LRSCNFKHVKFKLSLFPKLHIIILKTKIYFPTYAFMPYFNIIFKKKTLTTWAYIR 632
           LRS  F+  +F + + P ++ II+   +   TY F P    I KK T   W +++
Sbjct: 31  LRSEWFRTFQFLIYIPPLINFIIISNWLLAVTYCFAPTEQKI-KKATEFVWEHLK 84


>Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.6 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -1

Query: 274 KLIRINFFKTITYIHCICFITSMPGFIMVIVLRICFFFVRIIFYNFLIRNLFGLLHF 104
           K I +N    +TY     F   +   I++++L+I +   RI   +F+I+NL+ LL F
Sbjct: 34  KRIPVNLHMMLTYCR---FGVDLVYTIVLLILKIYYMLTRIS-NDFIIKNLYFLLVF 86


>U39998-5|AAK71421.2|  408|Caenorhabditis elegans Gustatory receptor
           family protein 5 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 483 FKHVKFKLSLFPK-LHIIILKTKIYFPTYAFMPYFNIIFKKKTLTTWAYIR 632
           +K ++F +S+    ++ + L T   F TYA   YF I F  K +   A  R
Sbjct: 189 YKELRFIMSIISSYMYSVWLTTTYVFVTYANAAYFEISFFNKEIRNLAGTR 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,354
Number of Sequences: 27780
Number of extensions: 263983
Number of successful extensions: 598
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)