Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0711
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    28   0.080
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    28   0.080
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.0  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 18/80 (22%), Positives = 33/80 (41%)
 Frame = -1

Query: 610 NQNXQIHFNVISIILVFQAVRMIFALVKIHDALKNSLEFVNNQLIINRYSYIEVLFFLH* 431
           N+  Q+   V SI++VF A+     LV I    + +   +N  L+    + + V F +  
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLAIADLLVTFLMMP 108

Query: 430 ISTVSLDLILWIVSYTKCKI 371
           +       + W      C+I
Sbjct: 109 LEIGWASTVSWYAGDAMCRI 128


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 18/80 (22%), Positives = 33/80 (41%)
 Frame = -1

Query: 610 NQNXQIHFNVISIILVFQAVRMIFALVKIHDALKNSLEFVNNQLIINRYSYIEVLFFLH* 431
           N+  Q+   V SI++VF A+     LV I    + +   +N  L+    + + V F +  
Sbjct: 49  NEGHQLSIIVYSILMVFSAIANTTVLVLIVKRRRKTPSRINTMLMHLAIADLLVTFLMMP 108

Query: 430 ISTVSLDLILWIVSYTKCKI 371
           +       + W      C+I
Sbjct: 109 LEIGWASTVSWYAGDAMCRI 128


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 580 ISIILVFQAVRMIFALVKIHDALKNSLEFVNNQ 482
           I+++    +  M+F + + +D   +S+ FVNNQ
Sbjct: 388 IALLKACSSEVMMFRMARRYDVQTDSILFVNNQ 420


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -1

Query: 430 ISTVSLDLILWIVSYTKCKIQSLPIHVLYQTYNTEPPER*YTCFYIFLFILI 275
           I++ + ++  W + YT   I ++    ++  +N     R Y+ F +FLF +I
Sbjct: 30  ITSTNNEVPRWYICYTIGVIITIGCLCIWSIFNKWNQFRSYSNFSVFLFDII 81


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 154 GINFEQIIIRFH*ISTVHRNVIIINNADNDLLWNSI 261
           G NFE     ++ I    R +  IN+A N +L+N I
Sbjct: 321 GSNFEIGFENYYNILYFSRIMFHINSAVNPILYNII 356


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 445 FFLH*ISTVSLDLILWIVSYTKCKIQSL 362
           F LH  +T    L  WIV YT  K+  +
Sbjct: 152 FMLHCNNTTWRCLYRWIVLYTLSKMSQV 179


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 310 INALVVQCCKFDIGHVSVNFEFYI 381
           I  ++   C F IG  S  F FYI
Sbjct: 505 IPVILTSVCYFMIGLNSQGFRFYI 528


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,115
Number of Sequences: 336
Number of extensions: 3562
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)