Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0711
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36035-1|AAA03652.1| 169|Homo sapiens protein ( Human periphera... 37 0.057
L21954-1|AAA18228.1| 169|Homo sapiens peripheral benzodiazepine... 37 0.057
BT006949-1|AAP35595.1| 169|Homo sapiens benzodiazapine receptor... 37 0.057
BC001110-1|AAH01110.1| 169|Homo sapiens translocator protein (1... 37 0.057
AY383615-1|AAQ75703.1| 169|Homo sapiens benzodiazapine receptor... 37 0.057
AB076380-1|BAC00958.1| 62|Homo sapiens Peripheral-type Benzodi... 37 0.057
AB076379-1|BAC00957.1| 62|Homo sapiens Peripheral-type Benzodi... 37 0.057
AL031778-2|CAB44739.1| 170|Homo sapiens protein ( Human DNA seq... 37 0.075
Z82214-1|CAB55884.1| 169|Homo sapiens translocator protein (18k... 36 0.17
U12421-1|AAA83252.1| 169|Homo sapiens mitochondrial benzodiazep... 36 0.17
CR456409-1|CAG30295.1| 169|Homo sapiens BZRP protein. 36 0.17
AY998017-1|AAY45787.1| 169|Homo sapiens peripheral benzodiazepi... 36 0.17
AF075590-1|AAC31173.1| 143|Homo sapiens peripheral-type benzodi... 36 0.17
AF075589-1|AAC31172.1| 143|Homo sapiens peripheral-type benzodi... 36 0.17
>M36035-1|AAA03652.1| 169|Homo sapiens protein ( Human peripheral
benzodiazepine receptor (hpbs) mRNA, complete cds. ).
Length = 169
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 137 LYPYLAWLAFATTLNYCVWRDN 158
>L21954-1|AAA18228.1| 169|Homo sapiens peripheral benzodiazepine
receptor protein.
Length = 169
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 137 LYPYLAWLAFATTLNYCVWRDN 158
>BT006949-1|AAP35595.1| 169|Homo sapiens benzodiazapine receptor
(peripheral) protein.
Length = 169
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 137 LYPYLAWLAFATTLNYCVWRDN 158
>BC001110-1|AAH01110.1| 169|Homo sapiens translocator protein
(18kDa) protein.
Length = 169
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 137 LYPYLAWLAFATTLNYCVWRDN 158
>AY383615-1|AAQ75703.1| 169|Homo sapiens benzodiazapine receptor
(peripheral) protein.
Length = 169
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 137 LYPYLAWLAFATTLNYCVWRDN 158
>AB076380-1|BAC00958.1| 62|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 62
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 30 LYPYLAWLAFATTLNYCVWRDN 51
>AB076379-1|BAC00957.1| 62|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 62
Score = 37.1 bits (82), Expect = 0.057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL +A++L+Y +W++N
Sbjct: 30 LYPYLAWLAFATTLNYCVWRDN 51
>AL031778-2|CAB44739.1| 170|Homo sapiens protein ( Human DNA
sequence from clone RP1-34B21 on chromosome 6p12.1-21.1.
).
Length = 170
Score = 36.7 bits (81), Expect = 0.075
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNNPKPV 87
L+PYLAWL S+L+Y++W+++ PV
Sbjct: 135 LLPYLAWLTVTSALTYHLWRDSLCPV 160
>Z82214-1|CAB55884.1| 169|Homo sapiens translocator protein (18kDa)
protein.
Length = 169
Score = 35.5 bits (78), Expect = 0.17
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL + ++L+Y +W++N
Sbjct: 137 LYPYLAWLAFTTTLNYCVWRDN 158
>U12421-1|AAA83252.1| 169|Homo sapiens mitochondrial benzodiazepine
receptor protein.
Length = 169
Score = 35.5 bits (78), Expect = 0.17
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL + ++L+Y +W++N
Sbjct: 137 LYPYLAWLAFTTTLNYCVWRDN 158
>CR456409-1|CAG30295.1| 169|Homo sapiens BZRP protein.
Length = 169
Score = 35.5 bits (78), Expect = 0.17
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL + ++L+Y +W++N
Sbjct: 137 LYPYLAWLAFTTTLNYCVWRDN 158
>AY998017-1|AAY45787.1| 169|Homo sapiens peripheral benzodiazepine
receptor protein.
Length = 169
Score = 35.5 bits (78), Expect = 0.17
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL + ++L+Y +W++N
Sbjct: 137 LYPYLAWLAFTTTLNYCVWRDN 158
>AF075590-1|AAC31173.1| 143|Homo sapiens peripheral-type
benzodiazepine receptor protein.
Length = 143
Score = 35.5 bits (78), Expect = 0.17
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL + ++L+Y +W++N
Sbjct: 111 LYPYLAWLAFTTTLNYCVWRDN 132
>AF075589-1|AAC31172.1| 143|Homo sapiens peripheral-type
benzodiazepine receptor protein.
Length = 143
Score = 35.5 bits (78), Expect = 0.17
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 10 LIPYLAWLGYASSLSYYIWKNN 75
L PYLAWL + ++L+Y +W++N
Sbjct: 111 LYPYLAWLAFTTTLNYCVWRDN 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,908,400
Number of Sequences: 237096
Number of extensions: 1726483
Number of successful extensions: 2435
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2432
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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