Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0710
(593 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 161 8e-39
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 49 9e-05
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 48 2e-04
UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-direct... 48 2e-04
UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-direct... 37 0.41
UniRef50_Q7UGF2 Cluster: Helicase, Snf2 family; n=1; Pirellula s... 36 0.54
UniRef50_Q5CRZ5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.7
UniRef50_A4HML5 Cluster: Putative uncharacterized protein; n=3; ... 35 1.7
UniRef50_Q7UTN1 Cluster: Sensor protein; n=1; Pirellula sp.|Rep:... 34 2.2
UniRef50_A0RUI4 Cluster: Metal-dependent phosphoesterase; n=2; T... 34 2.9
UniRef50_Q08VC6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A0KHX0 Cluster: Alcohol dehydrogenase, iron-containing;... 32 8.8
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 161 bits (392), Expect = 8e-39
Identities = 82/93 (88%), Positives = 82/93 (88%)
Frame = -2
Query: 532 PV*PGLXPSXQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNAS 353
P P PS QDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKL DDI ELLRAKNAS
Sbjct: 259 PFSPDSTPSPQDTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLPDDIGELLRAKNAS 318
Query: 352 XRAYDRYPTAENRIRMRALQRDVKSRIAEVRDA 254
RAYDRYPT ENRIRMRALQR VKSRIAEVRDA
Sbjct: 319 IRAYDRYPTVENRIRMRALQRGVKSRIAEVRDA 351
Score = 159 bits (386), Expect = 5e-38
Identities = 76/87 (87%), Positives = 78/87 (89%)
Frame = -3
Query: 261 EMQWSDFLEGLAPXQRSYYRLARTLKSDTVVTMPPXVGXXGXLAAFDDDEKAELLADTLQ 82
+ +WSDFLEGLAP QRSYYRLARTLKSDTVVTMPP VG G LAAFDDDEKAELLADTLQ
Sbjct: 350 DARWSDFLEGLAPSQRSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLADTLQ 409
Query: 81 TQCTPXTQSVDPVHVELVDSEVERRAS 1
TQCTP QS DPVHVELVDSEVERRAS
Sbjct: 410 TQCTPSIQSADPVHVELVDSEVERRAS 436
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 48.8 bits (111), Expect = 9e-05
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = -3
Query: 363 RTPRXAPTTGILPRKIVFECVPYNAT*SLASPKSEMQWSDFLEGLAPXQRSYYRLARTLK 184
R R A TG + + + +L+ ++E +W L+ L S +R++R L+
Sbjct: 785 RARRIAQRTGFPVDRAEANRLRWEVRKALSDFRNE-RWEAKLQSLTTEDNSVWRMSRVLR 843
Query: 183 SDTVVTMPPXVGXXGXLAAFDDDEKAELLADTLQTQCTPXTQSVDPVHVELVDSEVERRA 4
SD +PP G + F D+EKAE A ++ QC+ + D HVE ++ VE A
Sbjct: 844 SDRK-PLPPIHSENGIV--FTDEEKAEAFALSMSRQCSLNLTNADLDHVEEIEDHVESIA 900
Query: 3 S 1
+
Sbjct: 901 T 901
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = -3
Query: 255 QWSDFLEGLAPXQRSYYRLARTLKSDTVVTMPPXVGXXGXLAAFDDDEKAELLADTLQTQ 76
+W L+ L S +R++R L+SD +PP G + F D+EKAE A ++ Q
Sbjct: 398 RWEAKLQSLTTEDNSVWRMSRVLRSDRK-PLPPIHSENGIV--FTDEEKAEAFALSMSRQ 454
Query: 75 CTPXTQSVDPVHVELVDSEVERRAS 1
C+ + D HVE ++ VE A+
Sbjct: 455 CSLNLTNADLDHVEEIEDHVESIAT 479
>UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 894
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = -3
Query: 255 QWSDFLEGLAPXQRSYYRLARTLKSDTVVTMPPXVGXXGXLAAFDDDEKAELLADTLQTQ 76
+W L+ L S +R++R L+SD +PP G + F D+EKAE A ++ Q
Sbjct: 590 RWEVKLQSLTTEDNSVWRMSRVLRSDRK-PLPPIHSENGIV--FTDEEKAEAFALSMSRQ 646
Query: 75 CTPXTQSVDPVHVELVDSEVERRAS 1
C+ + D HVE ++ VE A+
Sbjct: 647 CSLNLTNADLEHVEEIEDHVESIAT 671
>UniRef50_UPI0000D5784F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 421
Score = 36.7 bits (81), Expect = 0.41
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = -3
Query: 201 LARTLKSDTVVTMPPXVGXXGXLAAFDDDEKAELLADTLQTQCTPXTQSVDPVHVELVDS 22
++R L+SD +PP G + F D+EKAE A ++ QC+ + D HVE ++
Sbjct: 1 MSRVLRSDRK-PLPPIHSEKGIV--FTDEEKAEAFALSMSRQCSLNLTNADLDHVEEIED 57
Query: 21 EVERRAS 1
+E A+
Sbjct: 58 HLESIAT 64
>UniRef50_Q7UGF2 Cluster: Helicase, Snf2 family; n=1; Pirellula
sp.|Rep: Helicase, Snf2 family - Rhodopirellula baltica
Length = 914
Score = 36.3 bits (80), Expect = 0.54
Identities = 20/91 (21%), Positives = 41/91 (45%)
Frame = -2
Query: 475 LTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASXRAYDRYPTAENRIRMRAL 296
L H+ + +D S ++V +D++ L A + YP AE ++ +
Sbjct: 258 LLFHLPAEVDESIMEIVGNGATKPMFAADEVMNRLNAIETAGHDVKIYPDAEAFLQRELM 317
Query: 295 QRDVKSRIAEVRDAVV*FLRRTRALSKVLLP 203
Q+ ++ ++R ++ RT+ L+ LLP
Sbjct: 318 QKHIRRECDQIRSSISDHPLRTKLLNAELLP 348
>UniRef50_Q5CRZ5 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 952
Score = 34.7 bits (76), Expect = 1.7
Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = -2
Query: 499 DTAEAIDILTSHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASX-RAYDR-YPT 326
D + I T +I + L SS +V+A ++ K+ + I ++ +S ++R + T
Sbjct: 431 DMSNMFKIATKNIKALLSSSSSKVIANSIVNDKKIFNSISKIREVYLSSIIDKFNRLFET 490
Query: 325 A-ENRIRMRALQRDVKSRIAEVRDAVV*FLRRTRALSKV 212
N+ + ++ SRI+E+ ++ LRRTR+ ++
Sbjct: 491 IIPNKNNLSDSYEEISSRISEITQEIIEELRRTRSCDEI 529
>UniRef50_A4HML5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 622
Score = 34.7 bits (76), Expect = 1.7
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -2
Query: 433 QVVAEDFLHRFKLSDDIRELLRAKNASXRAYDRYPTAENRIRMRALQRDVKSR 275
Q + EDF H+ +L+ D E LRAKNA R + ++ RALQR R
Sbjct: 324 QRLCEDFQHQVQLAADA-EKLRAKNAELRVQLQEALESQQLTRRALQRTQSQR 375
>UniRef50_Q7UTN1 Cluster: Sensor protein; n=1; Pirellula sp.|Rep:
Sensor protein - Rhodopirellula baltica
Length = 1030
Score = 34.3 bits (75), Expect = 2.2
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = -2
Query: 403 FKLSDDIRELLRAKNASXRAYDRYPTAENRIRMRALQRDVKSRIAEVRDAVV*FLRRTRA 224
F L + REL +N S A + P AE R +LQR++ I E DA + RA
Sbjct: 776 FDLINSYRELRNDENPSELAQEVVPKAEASCRFDSLQRNITESIQEAHDASNRVIDIVRA 835
Query: 223 LSKVLLPLSS 194
+ + P +S
Sbjct: 836 MKTMSHPGTS 845
>UniRef50_A0RUI4 Cluster: Metal-dependent phosphoesterase; n=2;
Thermoprotei|Rep: Metal-dependent phosphoesterase -
Cenarchaeum symbiosum
Length = 305
Score = 33.9 bits (74), Expect = 2.9
Identities = 34/98 (34%), Positives = 45/98 (45%)
Frame = -2
Query: 469 SHITSTLDRSSKQVVAEDFLHRFKLSDDIRELLRAKNASXRAYDRYPTAENRIRMRALQR 290
SH+ STL R + + AED L D I + LR S RA Y +A R M +
Sbjct: 174 SHVISTLGRCTNVIEAEDSL------DGILDALRHGRVSIRA-TGYASA--RETMEYFRY 224
Query: 289 DVKSRIAEVRDAVV*FLRRTRALSKVLLPLSSYSQIGY 176
V + +RD V F R+R + VLL L + S Y
Sbjct: 225 KVDNSAEYIRDYVGEFYPRSRWIFSVLLGLFNRSPESY 262
>UniRef50_Q08VC6 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 206
Score = 33.1 bits (72), Expect = 5.0
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -2
Query: 445 RSSKQVVAEDFLHRFKLSDDIR--ELLRAKNASXRAYDRYPTAENRIRMRALQRDVKSRI 272
R KQ+ E+ + RF + R + LR +A RAY AENR + Q +V+
Sbjct: 47 RDLKQL--ENLIARFDAASSRRHHDALRQVDADLRAYVAADLAENRYELSDAQSEVRRDT 104
Query: 271 AEVRDA 254
EVRDA
Sbjct: 105 HEVRDA 110
>UniRef50_A0KHX0 Cluster: Alcohol dehydrogenase, iron-containing;
n=4; Gammaproteobacteria|Rep: Alcohol dehydrogenase,
iron-containing - Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240)
Length = 384
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 165 MPPXVGXXGXLAAFDDDEKAELLADTLQTQCTP 67
MP +G G LAA D AE+++ L+ CTP
Sbjct: 325 MPAGIGDTGLLAADFDQRLAEMVSQALRDNCTP 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,352,962
Number of Sequences: 1657284
Number of extensions: 8735934
Number of successful extensions: 19880
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19873
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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