Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0710
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.4  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    23   9.8  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 496 TAEAIDILTSHITSTLDRSSKQVVAEDF 413
           T +  + L  +I  T+  SSK VVA DF
Sbjct: 95  TVQEFEELLDNIVLTVSGSSKFVVAGDF 122


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -3

Query: 414 SFTASNCPTILGNSLELRTPRXAPTTGILPRKIVFECVPYNAT*SLASPKSE 259
           S TAS+     G+S     P     +   P K V  C P++   +L +P+S+
Sbjct: 127 STTASSEQACSGSSSSSPEPNLDCLSKCSPTKCVPFCRPFSGQTALLTPESQ 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,285
Number of Sequences: 2352
Number of extensions: 10150
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)