Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0710
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004901-1|AAO47879.1|  483|Drosophila melanogaster LD07439p pro...    31   1.2  
AF068758-1|AAC79684.1|  823|Drosophila melanogaster SIR2 protein.      31   1.2  
AE014134-2285|AAF53248.1|  823|Drosophila melanogaster CG5216-PA...    31   1.2  
U67057-1|AAB07545.1|  427|Drosophila melanogaster beaten path pr...    30   2.1  
AE014134-2669|AAF53500.1|  427|Drosophila melanogaster CG4846-PA...    30   2.1  

>BT004901-1|AAO47879.1|  483|Drosophila melanogaster LD07439p
           protein.
          Length = 483

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/82 (24%), Positives = 39/82 (47%)
 Frame = -3

Query: 408 TASNCPTILGNSLELRTPRXAPTTGILPRKIVFECVPYNAT*SLASPKSEMQWSDFLEGL 229
           ++SNC + +    +LR  +    TG +PR+++   +P+ AT         + W D+L  L
Sbjct: 137 SSSNCSSSVEPDWKLRWLQREFYTGRVPRQVIASIMPHFATGLAGDTDDSVLW-DYLAHL 195

Query: 228 APXQRSYYRLARTLKSDTVVTM 163
               +   +LA     D V+++
Sbjct: 196 LNEPKRRNKLASVNTFDDVISL 217


>AF068758-1|AAC79684.1|  823|Drosophila melanogaster SIR2 protein.
          Length = 823

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/82 (24%), Positives = 39/82 (47%)
 Frame = -3

Query: 408 TASNCPTILGNSLELRTPRXAPTTGILPRKIVFECVPYNAT*SLASPKSEMQWSDFLEGL 229
           ++SNC + +    +LR  +    TG +PR+++   +P+ AT         + W D+L  L
Sbjct: 135 SSSNCSSSVEPDWKLRWLQREFYTGRVPRQVIASIMPHFATGLAGDTDDSVLW-DYLAHL 193

Query: 228 APXQRSYYRLARTLKSDTVVTM 163
               +   +LA     D V+++
Sbjct: 194 LNEPKRRNKLASVNTFDDVISL 215


>AE014134-2285|AAF53248.1|  823|Drosophila melanogaster CG5216-PA
           protein.
          Length = 823

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/82 (24%), Positives = 39/82 (47%)
 Frame = -3

Query: 408 TASNCPTILGNSLELRTPRXAPTTGILPRKIVFECVPYNAT*SLASPKSEMQWSDFLEGL 229
           ++SNC + +    +LR  +    TG +PR+++   +P+ AT         + W D+L  L
Sbjct: 137 SSSNCSSSVEPDWKLRWLQREFYTGRVPRQVIASIMPHFATGLAGDTDDSVLW-DYLAHL 195

Query: 228 APXQRSYYRLARTLKSDTVVTM 163
               +   +LA     D V+++
Sbjct: 196 LNEPKRRNKLASVNTFDDVISL 217


>U67057-1|AAB07545.1|  427|Drosophila melanogaster beaten path
           precursor protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 366 LRTPRXAP-TTGILPRKIVFECVPYNAT*SLASPKSEMQWSDFLEGLAPXQRSYYRLART 190
           + TP  AP  TGI PR  V + +  N T   + P + + W+   E + P    ++++ R 
Sbjct: 136 IETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKILRD 195

Query: 189 LKSD 178
            ++D
Sbjct: 196 ARND 199


>AE014134-2669|AAF53500.1|  427|Drosophila melanogaster CG4846-PA
           protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = -3

Query: 366 LRTPRXAP-TTGILPRKIVFECVPYNAT*SLASPKSEMQWSDFLEGLAPXQRSYYRLART 190
           + TP  AP  TGI PR  V + +  N T   + P + + W+   E + P    ++++ R 
Sbjct: 136 IETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKILRD 195

Query: 189 LKSD 178
            ++D
Sbjct: 196 ARND 199


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,377,425
Number of Sequences: 53049
Number of extensions: 420833
Number of successful extensions: 812
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)