Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0708
         (701 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24691 Cluster: Manirer-2 protein; n=12; Eumetazoa|Rep:...    42   0.019
UniRef50_Q53H47 Cluster: Histone-lysine N-methyltransferase SETM...    39   0.10 
UniRef50_Q9N523 Cluster: Putative uncharacterized protein Y39A3A...    36   0.73 
UniRef50_Q45FI5 Cluster: Transposase; n=28; Pseudocoelomata|Rep:...    33   5.1  
UniRef50_Q3SMX3 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  
UniRef50_Q4P6V2 Cluster: Putative uncharacterized protein; n=1; ...    33   6.8  

>UniRef50_Q24691 Cluster: Manirer-2 protein; n=12; Eumetazoa|Rep:
           Manirer-2 protein - Dugesia tigrina (Planarian)
          Length = 365

 Score = 41.5 bits (93), Expect = 0.019
 Identities = 27/66 (40%), Positives = 35/66 (53%)
 Frame = -1

Query: 494 LPPVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLV 315
           L P+L LHDN RPH+A+ TV+KL    Q     +  H     DL   + +FFQSL  FL 
Sbjct: 236 LTPIL-LHDNARPHSAKNTVAKL----QQLGLETLRHPTYSPDLAPTDCHFFQSLDNFLS 290

Query: 314 RKKINT 297
            K   +
Sbjct: 291 GKNFTS 296


>UniRef50_Q53H47 Cluster: Histone-lysine N-methyltransferase SETMAR
           (EC 2.1.1.43) (SET domain and mariner transposase fusion
           gene-containing protein) (Metnase) (Hsmar1) [Includes:
           Histone-lysine N-methyltransferase; Mariner transposase
           Hsmar1]; n=134; Eumetazoa|Rep: Histone-lysine
           N-methyltransferase SETMAR (EC 2.1.1.43) (SET domain and
           mariner transposase fusion gene-containing protein)
           (Metnase) (Hsmar1) [Includes: Histone-lysine
           N-methyltransferase; Mariner transposase Hsmar1] - Homo
           sapiens (Human)
          Length = 671

 Score = 39.1 bits (87), Expect = 0.10
 Identities = 24/65 (36%), Positives = 34/65 (52%)
 Frame = -1

Query: 488 PVLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRK 309
           P+L LHDN RPH AQ T+ KL        +   PH     DL+   ++ F+ L+ FL  K
Sbjct: 570 PIL-LHDNARPHVAQPTLQKL----NELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGK 624

Query: 308 KINTQ 294
           + + Q
Sbjct: 625 RFHNQ 629


>UniRef50_Q9N523 Cluster: Putative uncharacterized protein Y39A3A.1;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein Y39A3A.1 - Caenorhabditis
           elegans
          Length = 311

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 23/62 (37%), Positives = 31/62 (50%)
 Frame = -1

Query: 485 VLPLHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRKK 306
           +L LHDN RPHTA +T  KL    Q       PH     DL   +++ F+SL   L  +K
Sbjct: 209 LLLLHDNARPHTALKTRQKL----QTLGIEVLPHPPYSPDLAPTDYHLFRSLQNHLAGQK 264

Query: 305 IN 300
            +
Sbjct: 265 FH 266


>UniRef50_Q45FI5 Cluster: Transposase; n=28; Pseudocoelomata|Rep:
           Transposase - Adineta vaga
          Length = 345

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 22/61 (36%), Positives = 32/61 (52%)
 Frame = -1

Query: 476 LHDNVRPHTAQQTVSKLL*S*QAGSFASPPHSLTLLDLVLMEFNFFQSLHYFLVRKKINT 297
           LHDN RPH A+    KLL   + G + + PH     DL   +++ F+SL   L  KK + 
Sbjct: 245 LHDNARPHVAKSAREKLL---KLG-WITIPHPPYSPDLAPTDYHLFRSLSNDLRDKKFDD 300

Query: 296 Q 294
           +
Sbjct: 301 E 301


>UniRef50_Q3SMX3 Cluster: Putative uncharacterized protein; n=1;
           Nitrobacter winogradskyi Nb-255|Rep: Putative
           uncharacterized protein - Nitrobacter winogradskyi
           (strain Nb-255 / ATCC 25391)
          Length = 483

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +2

Query: 350 TPSAQDLTKSRSAVVTQNFQLVKIIVA*RPSVVLYEVERYHVRAELVVG 496
           TPSA DL+ S +  + Q +Q  K I   + +  LY++E Y V   LV+G
Sbjct: 377 TPSA-DLSGSINQALDQKYQFQKQIAQIKDNTRLYDIESYAVHCCLVIG 424


>UniRef50_Q4P6V2 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 853

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -1

Query: 515 WYHIQEVLPPVLPLHDNVRPHTAQQTVSKLL 423
           W+ +   L PVLP H N  P TAQ+ V +LL
Sbjct: 223 WWQLFRFLRPVLPDHPNDSPQTAQRWVHELL 253


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,048,070
Number of Sequences: 1657284
Number of extensions: 13882181
Number of successful extensions: 31052
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31047
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)